Jim, I traced the problem to my jalview.jlnp file that I use to launch jalview. Although Java downloaded the new jalview 2.8.1 I continued to launch jalview with a jalview.jnlp file that I have in my /Applications folder which had reference to the older version of JABAWS. This has happened several times before over the years. How can always launch the program with the most recent jalview? Use a link?
My platform is OS X 10.8.5 running Oracle Java 1.7.0_60. Regards, Mark software that I am running is 2.8.1 _______________________________________________ Mark A. Saper, Ph.D. Associate Professor of Biological Chemistry, U-M Medical School 3040 Chemistry Building | [email protected] | +1 (734) 764-3353 > On Jun 12, 2014, at 2:06 AM, Jim Procter <[email protected]> > wrote: > > Hi Mark. >> On Wed Jun 11 21:30:41 2014, Mark A Saper wrote: >> Is JABAWS available? A couple of days ago the Sequence alignment services >> became "greyed" out. > > We upgraded JABAWS last week, at the same time as releasing v2.8.1. We didn't > expect this to cause any problems - since our tests showed that v2.1 works > with Jalview 2.7 onwards (and most likely, 2.6 onwards, too). However, there > may be issues with java versions on different platforms. > > Could you follow the faq (http://www.jalview.org/faq#bug) and send me your > Jalview console log output ? > > Thanks! > Jim. _______________________________________________ Jalview-discuss mailing list [email protected] http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-discuss
