You're right - I had thought that the BioLinux package for Jalview 2.8.1 had already made it to debian, too. It seems not. You can get Jalview 2.8.0b1 via https://launchpad.net/~tbooth/+archive/ppa1
On 21/06/2014 13:39, Zhao lina wrote: > Can you give me a more detail about "launch it via an html page". > > Currently I am trying the > > $ appletviewer jalviewApplet.jar I just checked on a not-quite-up-to-date debian box, and I could do: wget http://www.jalview.org/source/jalview_2_8_1.tar.gz tar -zxf jalview_2_8_1.tar.gz cd jalview ant pubapplet # works fine up until the signjar step - which fails on my older Oracle JDK appletviewer -J-Djava.ext.dirs=/usr/lib/jvm/java-7-oracle/jre/lib dist/examples/applets.html As you can see, I was using the non-free oracle jdk. You many need a different path for openjdk (and probably need to use 1.7, not 1.8!). However, are you really wanting to launch the applet ??? If you are actually after the desktop (which is what apt-get install jalview gives you) then all you need to do is: ant makedist java -Djava.ext.dirs=lib -jar dist/jalview.jar let me know how you get on ... Jim The University of Dundee is a registered Scottish Charity, No: SC015096 _______________________________________________ Jalview-discuss mailing list [email protected] http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-discuss
