Hi
I am a new user of jalview. I am using the program to inspect/edit a nucleotide
alignment of about 188000 bp. The sequences that I'm inspecting are all at the
intraspecific level so most of my alignment is identical. I wish to inspect
those residues for which there is some evidence of variation. Is there a way to
view only those residues with a consensus score less than a certain threshold.
Also as an aside, this is my first time using the list serve. I didn't see a
way to search old archives other than to click on the digest month by month and
manually read through the list of headings. Can someone please tell me how to
search for particular topics so I can avoid posting redundant questions?
Thanks
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