Hello Petya,
Sorry to hear that! To help me investigate... 1) Can you confirm the versions of Jalview and Java that you are running - this is logged at the start of the Jalview Console output (Tools | Show Java Console). 2) Do you choose 'Text' or 'Lineart' for the EPS output? (If you don't see this option, you may have it set as a preference EPS_RENDERING in your home directory .jalview_properties file.) 3) Are you able to share the output EPS file (by private email if preferred)? 4) Does this also happen with our 'example' alignment? To load this: File | Input Alignment | From URL...| http://www.jalview.org/examples/uniref50.fa Thanks and best regards, Mungo [University of Dundee shield logo]<http://uod.ac.uk/sig-home> Mungo Carstairs Jalview Computational Scientist The Barton Group Division of Computational Biology School of Life Sciences University of Dundee, Dundee, Scotland, UK www.jalview.org<http://www.jalview.org> www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk> g.m.carsta...@dundee.ac.uk<mailto:g.m.carsta...@dundee.ac.uk> [University of Dundee Facebook]<http://uod.ac.uk/sig-fb> [University of Dundee Twitter] <http://uod.ac.uk/sig-tw> [University of Dundee LinkedIn] <http://uod.ac.uk/sig-li> [University of Dundee YouTube] <http://uod.ac.uk/sig-yt> [University of Dundee Instagram] <http://uod.ac.uk/sig-ig> [University of Dundee Snapchat] <http://uod.ac.uk/sig-sc> We're Scottish University of the Year again!<http://uod.ac.uk/sig-strapline> The Times / Sunday Times Good University Guide 2016 and 2017 ________________________________ From: jalview-discuss-boun...@jalview.org <jalview-discuss-boun...@jalview.org> on behalf of Petya Violinova Krasteva <p...@cornell.edu> Sent: 10 August 2018 15:02:28 To: jalview-discuss@jalview.org Subject: [Jalview-discuss] Image export in EPS LineArt format on Mac does not work Hello, I am trying to export some alignment images from Jalview into high-resolution EPS format for downstream figure making in photoshop. I am working on a MacAir with MacOS High Sierra. While this functionality was working fine a few weeks ago, it no longer does as I am getting black insets for the alignment part of the image and only the text for the sequences' titles on the left is visible in the exported .eps file. I am not sure why this problem appeared. I tried to update both Jalview and my Mac, but the problem persists. Any ideas why this occurs and how it can be fixed? Thanks in advance, Petya __________________________________________________ Petya V. Krasteva, Ph.D. Group Leader 'Structural Biology of Biofilms' Department of Biochemistry, Biophysics and Structural Biology Institute for Integrative Biology of the Cell (I2BC) 91190 Gif-sur-Yvette, FR p...@cornell.edu<mailto:p...@cornell.edu> petya.krast...@i2bc.paris-saclay.fr<mailto:petya.krast...@i2bc.paris-saclay.fr> The University of Dundee is a registered Scottish Charity, No: SC015096
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