We are having this same exception, but it occurs when running packaging on a 
Java project.  Has anyone made any progress on this?  I can disable source 
control or disable the JBoss-IDE plugin and everything works.  Seems to be an 
interaction problem between the two plugins on Eclipse 3.0.1.  Any suggestions 
on how to make them play nicely togther?  I am running Eclipse 3.0.1, JBoss-IDE 
1.4.0, and ClearCase 6.0.25.  Does anyone know if the problem is with Eclipse, 
JBoss-IDE, or ClearCase?  The stack trace on the client is:

!ENTRY org.eclipse.core.runtime 4 2 Jan 07, 2005 11:14:09.154
!MESSAGE An internal error occurred during: "Packaging Generation".
!STACK 0
java.lang.IllegalArgumentException: Attempted to beginRule: R/, does not match 
outer scope rule: P/hec_9.1.75
        at org.eclipse.core.internal.runtime.Assert.isLegal(Assert.java:58)
        at 
org.eclipse.core.internal.jobs.ThreadJob.illegalPush(ThreadJob.java:106)
        at org.eclipse.core.internal.jobs.ThreadJob.push(ThreadJob.java:200)
        at 
org.eclipse.core.internal.jobs.ImplicitJobs.begin(ImplicitJobs.java:80)
        at 
org.eclipse.core.internal.jobs.JobManager.beginRule(JobManager.java:170)
        at 
org.eclipse.core.internal.resources.WorkManager.checkIn(WorkManager.java:95)
        at 
org.eclipse.core.internal.resources.Workspace.prepareOperation(Workspace.java:1628)
        at 
org.eclipse.core.internal.resources.Resource.refreshLocal(Resource.java:1224)
        at 
org.jboss.ide.eclipse.packaging.ui.actions.PackagingRunAction$1.run(PackagingRunAction.java:234)
        at org.eclipse.core.internal.jobs.Worker.run(Worker.java:66)



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