Yes indeed, it sounds like the chicken and egg problem. But the fowl problem 
isn't unsolvable: First, there was a chicken like creature that lays the egg. 
Not a really surprising answer thinking about evolution, or? Let's go a step 
ahead: If the chicken and egg problem is solvable, why should the deployment 
bootstrap problem not be solvable? Ok, this line of argument may assailable.

But seriously, why do you secure your server-app? In my opinion you secure it 
against clients. Is the deployment of your server-app a server or a client 
operation? I would answer: "A server-sided operation". Furthermore, if I write 
the bootstrap and deploy it together with the server-application, shouldn't the 
container trust the code of the bootstrap if I do? 

Second thought: One very important feature of j2ee is the abstraction layer 
accessing databases. By this, you can really write a server application 
sql-aware and independent from database vendors. But why must I use a sql 
script and care about the differences between vendors when I initialize the 
database? Why can't I use consequently use the abstraction layer even when I 
initialize the database? Would you like buy a Porsche 911 without keys (if you 
had the money to buy one)? Would you really like to short-circuit you own 911? 
I don't! I would ask for the keys!

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