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Daniel: this is expected behaviour - Rlog activities (polling and changelog generation) happen on the Master which is why the path is converted to contain Windows separators in your case. Polling isn't given a workspace so there would be no way to execute polling on a slave. Changelog generation could potentially be done on the same machine as the checkout, but this wouldn't fix the polling issue. This therefore isn't a suitable solution as polling would still fail for any users with a similar setup to yours.
To fix this properly, you'll have to copy your private key file to \home\myUser\.ssh\id_dsa on your master (or set environmental variables that specify where it is on each machine and then copy it to the relevant location).