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The excluded files and subdirs themselves only exist in the second depot. The first depot DOES have a similar upper portion of the path, however, we don't overlap the two in our Workspace specs.
So yes, depot1 contains a similar set of upper paths and they diverge, but we don't map them together in the workspace. If we had the actual excluded subdirs and files only exist in depot2 - there shouldn't be any collisions.
So for ex. this exists in depot1 (the "ItemsX" share the same names in our Perforce):
"//depot1/ITEMA/Item B/..."
and depot2:
"//ITEMA/Item B/<newfoldernotinfirstdepot>/config/buildinfo/..."
ITEMA is the name of our second depot.