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Yep, plugin not-functional with current jgit
Update: I have another server with same versions of both git-server and scriptler which works fine. Upon comparing the two, I found that git-client was an older version (1.0.7) on the working server vs 1.1.1 on the one with this issue. I downgraded the server having a problem and it is working now.
Hope this helps tracking this down.