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It appears Jenkins tried to delete the workspace when it was still being accessed by Dependency-Check plugin.
By default, Dependency-Check Jenkins plugin will create the data directory inside the projects workspace. This can be overwritten when defining the data directory in the advanced configuration for the job.
Specifying a data directory outside the project's workspace has the additional benefit of being able to be shared by multiple Dependency-Check jobs on the same slave machine, saving both processing power and disk space.