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Woo-hoo, the patch in the previous comment works:
00:18:59.873 FATAL: HTML Publisher failure
00:18:59.873 hudson.util.IOException2: hudson.util.IOException2: Failed to extract /srv/jenkins/workspace/job/doc/html/*/
00:18:59.873 at hudson.FilePath.readFromTar(FilePath.java:2066)
00:18:59.873 at hudson.FilePath.copyRecursiveTo(FilePath.java:1978)
00:18:59.873 at hudson.FilePath.copyRecursiveTo(FilePath.java:1889)
00:18:59.873 at hudson.FilePath.copyRecursiveTo(FilePath.java:1872)
00:18:59.873 at htmlpublisher.HtmlPublisher.perform(HtmlPublisher.java:213)
00:18:59.873 at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20)
00:18:59.873 at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:785)
00:18:59.873 at hudson.model.AbstractBuild$AbstractBuildExecution.performAllBuildSteps(AbstractBuild.java:757)
00:18:59.873 at hudson.model.Build$BuildExecution.post2(Build.java:183)
00:18:59.873 at hudson.model.AbstractBuild$AbstractBuildExecution.post(AbstractBuild.java:706)
00:18:59.873 at hudson.model.Run.execute(Run.java:1690)
00:18:59.873 at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46)
00:18:59.873 at hudson.model.ResourceController.execute(ResourceController.java:88)
00:18:59.873 at hudson.model.Executor.run(Executor.java:246)
00:18:59.873 Caused by: java.io.IOException: High-level timeout waiting for activity on pipe
00:18:59.873 at hudson.remoting.FastPipedInputStream.read(FastPipedInputStream.java:180)
00:18:59.873 at hudson.util.HeadBufferingStream.read(HeadBufferingStream.java:61)
00:18:59.873 at com.jcraft.jzlib.InflaterInputStream.fill(InflaterInputStream.java:175)
00:18:59.873 at com.jcraft.jzlib.InflaterInputStream.read(InflaterInputStream.java:106)
00:18:59.873 at org.apache.tools.tar.TarBuffer.readBlock(TarBuffer.java:257)
00:18:59.873 at org.apache.tools.tar.TarBuffer.readRecord(TarBuffer.java:223)
00:18:59.873 at hudson.org.apache.tools.tar.TarInputStream.getNextEntry(TarInputStream.java:228)
00:18:59.873 at hudson.FilePath.readFromTar(FilePath.java:2044)
00:18:59.873 ... 13 more
So, the timeout as it is now is 1000s. Trying to cut that in 2 and see if any false positive timeouts would happen.