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It compares the contents of the workspace against the 'have' table, which is what normally gets updated on the server when you sync without -p. Since this table will presumably contain nothing on your workspace (assuming you have never synced it without -p), it will decide that all the files are untracked, and clean them as appropriate before syncing as it normally would with -p.
It won't be as quick as if you were syncing using a write-through replica, but at least it should be safe.