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Jenkins uses a patched variant of Ant's org.apache.tools.tar.TarInputStream imported from Ant 1.7.0:
https://github.com/jenkinsci/jenkins/tree/master/core/src/main/java/hudson/org/apache/tools/tar
Maybe it's time to update this a bit, there've been a few changes since – cannot tell whether relevant to this issue yet though:
http://svn.apache.org/viewvc/ant/core/trunk/src/main/org/apache/tools/tar/TarInputStream.java?view=log