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Thanks for responding Mark. Sorry for not adding the full versions of things.
Git Version: 1.9.5.msysgit.0
Git Plugin Version : 2.3.2
Git Client Plugin : 1.15.0
Multiple SCMs Plugin : 0.3
I added the port when I was trying to get this to work and got the same results. ssh:///[email protected]:22:relative_path/repo.git and ssh:///[email protected]:relative_path/repo.git both work from the command line as well as the job configuration (when it runs ls-remote in the background after the git url field loses focus). But when the job executes the scheme gets rewritten at "ssh:///". That's what really bothers me. When configuring the job or working from the command line, nothing is wrong. It's only when the job executes that this happens.