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I've found a temporary workaround by running the following script as a daily job:
cp ${JENKINS_HOME}/*.xml ${JENKINS_HOME}/scm-sync-configuration/checkoutConfgiguration/ rsync -avm --include='config.xml' -f 'hide,! */' ${JENKINS_HOME}/jobs/ ${JENKINS_HOME}/scm-sync-configuration/checkoutConfgiguration/jobs/ svn add --force ${JENKINS_HOME}/scm-sync-configuration/checkoutConfiguration/* if svn status ${JENKINS_HOME}/scm-sync-configuration/checkoutConfiguration/ | grep '^[AMCDG]' ; then svn ci ${JENKINS_HOME}/scm-sync-configuration/checkoutConfiguration/ -m "" else echo "No changes found" fi