Hey all, 

I'm having this sudden crazy problem where my Windows agent can't delete 
some files in its workspace anymore, failing all builds. It's getting a 
java.nio.file.AccessDeniedException on some files that it created. You can 
see the full exceptions at the end of the log here: 
http://d1m1s1b1.stat.columbia.edu:8080/job/Stan/job/develop/80/console also 
copied below.

I've tried so many things, including switching JVMs on master and agent, 
upgrading and switching to LTS, uninstalling and reinstalling a new agent 
service in a new working directory… Any tips or advice would be extremely 
appreciated; been trying to solve this all day and night since it started 
Thursday when the master rebooted during a job on the Windows agent.

Thanks in advance,
Sean

Full error:

java.nio.file.AccessDeniedException: 
C:\Jenkins2\workspace\Stan_develop-3CVGV42HAM7J3BLI3M44PCR6M52FN6ZQ65IEZ6TOSHJURSBO2PPA\src\test\test-models\bad\read_only
        at sun.nio.fs.WindowsException.translateToIOException(Unknown Source)
        at sun.nio.fs.WindowsException.rethrowAsIOException(Unknown Source)
        at sun.nio.fs.WindowsException.rethrowAsIOException(Unknown Source)
        at sun.nio.fs.WindowsFileSystemProvider.implDelete(Unknown Source)
        at sun.nio.fs.AbstractFileSystemProvider.deleteIfExists(Unknown Source)
        at java.nio.file.Files.deleteIfExists(Unknown Source)
        at hudson.Util.tryOnceDeleteFile(Util.java:297)
        at hudson.Util.deleteFile(Util.java:253)
Also:   hudson.remoting.Channel$CallSiteStackTrace: Remote call to 
JNLP4-connect connection from 
gelman-group-win.stat.columbia.edu/128.59.76.64:50229
                at 
hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1737)
                at hudson.remoting.UserResponse.retrieve(UserRequest.java:313)
                at hudson.remoting.Channel.call(Channel.java:952)
                at hudson.FilePath.act(FilePath.java:998)
                at hudson.FilePath.act(FilePath.java:987)
                at hudson.FilePath.deleteRecursive(FilePath.java:1192)
                at 
org.jenkinsci.plugins.workflow.steps.DeleteDirStep$Execution.run(DeleteDirStep.java:77)
                at 
org.jenkinsci.plugins.workflow.steps.DeleteDirStep$Execution.run(DeleteDirStep.java:69)
                at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1$1.call(SynchronousNonBlockingStepExecution.java:49)
                at hudson.security.ACL.impersonate(ACL.java:290)
                at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1.run(SynchronousNonBlockingStepExecution.java:46)
                at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
                at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
                at java.lang.Thread.run(Thread.java:748)
Caused: java.io.IOException: Unable to delete 
'C:\Jenkins2\workspace\Stan_develop-3CVGV42HAM7J3BLI3M44PCR6M52FN6ZQ65IEZ6TOSHJURSBO2PPA\src\test\test-models\bad\read_only'.
 Tried 3 times (of a maximum of 3) waiting 0.1 sec between attempts.
        at hudson.Util.deleteFile(Util.java:258)
        at hudson.FilePath.deleteRecursive(FilePath.java:1225)
        at hudson.FilePath.deleteContentsRecursive(FilePath.java:1234)
        at hudson.FilePath.deleteRecursive(FilePath.java:1216)
        at hudson.FilePath.deleteContentsRecursive(FilePath.java:1234)
        at hudson.FilePath.deleteRecursive(FilePath.java:1216)
        at hudson.FilePath.deleteContentsRecursive(FilePath.java:1234)
        at hudson.FilePath.deleteRecursive(FilePath.java:1216)
        at hudson.FilePath.deleteContentsRecursive(FilePath.java:1234)
        at hudson.FilePath.deleteRecursive(FilePath.java:1216)
        at hudson.FilePath.deleteContentsRecursive(FilePath.java:1234)
        at hudson.FilePath.deleteRecursive(FilePath.java:1216)
        at hudson.FilePath.access$1100(FilePath.java:208)
        at hudson.FilePath$13.invoke(FilePath.java:1195)
        at hudson.FilePath$13.invoke(FilePath.java:1192)
        at hudson.FilePath$FileCallableWrapper.call(FilePath.java:2816)
        at hudson.remoting.UserRequest.perform(UserRequest.java:210)
        at hudson.remoting.UserRequest.perform(UserRequest.java:53)
        at hudson.remoting.Request$2.run(Request.java:364)
        at 
hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
        at java.util.concurrent.FutureTask.run(Unknown Source)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
        at hudson.remoting.Engine$1$1.run(Engine.java:94)
        at java.lang.Thread.run(Unknown Source)
Also:   java.nio.file.AccessDeniedException: 
C:\Jenkins2\workspace\Stan_develop-3CVGV42HAM7J3BLI3M44PCR6M52FN6ZQ65IEZ6TOSHJURSBO2PPA\src\test\test-models\bad\stanc_helper.stan
                at sun.nio.fs.WindowsException.translateToIOException(Unknown 
Source)
                at sun.nio.fs.WindowsException.rethrowAsIOException(Unknown 
Source)
                at sun.nio.fs.WindowsException.rethrowAsIOException(Unknown 
Source)
                at sun.nio.fs.WindowsFileSystemProvider.newByteChannel(Unknown 
Source)
                at java.nio.file.spi.FileSystemProvider.newOutputStream(Unknown 
Source)
                at java.nio.file.Files.newOutputStream(Unknown Source)
                at hudson.util.IOUtils.copy(IOUtils.java:42)
                at hudson.FilePath.readFromTar(FilePath.java:2363)
        Also:   hudson.remoting.Channel$CallSiteStackTrace: Remote call to 
JNLP4-connect connection from 
gelman-group-win.stat.columbia.edu/128.59.76.64:50229
                        at 
hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1737)
                        at 
hudson.remoting.UserResponse.retrieve(UserRequest.java:313)
                        at hudson.remoting.Channel.call(Channel.java:952)
                        at hudson.FilePath.act(FilePath.java:998)
                        at hudson.FilePath.act(FilePath.java:987)
                        at hudson.FilePath.untar(FilePath.java:540)
                        at 
org.jenkinsci.plugins.workflow.flow.StashManager.unstash(StashManager.java:129)
                        at 
org.jenkinsci.plugins.workflow.support.steps.stash.UnstashStep$Execution.run(UnstashStep.java:74)
                        at 
org.jenkinsci.plugins.workflow.support.steps.stash.UnstashStep$Execution.run(UnstashStep.java:61)
                        at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1$1.call(SynchronousNonBlockingStepExecution.java:49)
                        at hudson.security.ACL.impersonate(ACL.java:290)
                        at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1.run(SynchronousNonBlockingStepExecution.java:46)
                        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                        at 
java.util.concurrent.FutureTask.run(FutureTask.java:266)
                        at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
                        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
                        at java.lang.Thread.run(Thread.java:748)
        Caused: java.io.IOException: Failed to extract StanSetup.tar.gz
                at hudson.FilePath.readFromTar(FilePath.java:2373)
                at hudson.FilePath.access$400(FilePath.java:208)
                at hudson.FilePath$4.invoke(FilePath.java:542)
                at hudson.FilePath$4.invoke(FilePath.java:540)
                at hudson.FilePath$FileCallableWrapper.call(FilePath.java:2816)
                at hudson.remoting.UserRequest.perform(UserRequest.java:210)
                at hudson.remoting.UserRequest.perform(UserRequest.java:53)
                at hudson.remoting.Request$2.run(Request.java:364)
                at 
hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72)
                at java.util.concurrent.FutureTask.run(Unknown Source)
                at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown 
Source)
                at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown 
Source)
                at hudson.remoting.Engine$1$1.run(Engine.java:94)
                at java.lang.Thread.run(Unknown Source)
        Caused: java.io.IOException: remote file operation failed: 
C:\Jenkins2\workspace\Stan_develop-3CVGV42HAM7J3BLI3M44PCR6M52FN6ZQ65IEZ6TOSHJURSBO2PPA
 at hudson.remoting.Channel@47c318f0:JNLP4-connect connection from 
gelman-group-win.stat.columbia.edu/128.59.76.64:50229
                at hudson.FilePath.act(FilePath.java:1005)
                at hudson.FilePath.act(FilePath.java:987)
                at hudson.FilePath.untar(FilePath.java:540)
                at 
org.jenkinsci.plugins.workflow.flow.StashManager.unstash(StashManager.java:129)
                at 
org.jenkinsci.plugins.workflow.support.steps.stash.UnstashStep$Execution.run(UnstashStep.java:74)
                at 
org.jenkinsci.plugins.workflow.support.steps.stash.UnstashStep$Execution.run(UnstashStep.java:61)
Caused: java.io.IOException: remote file operation failed: 
C:\Jenkins2\workspace\Stan_develop-3CVGV42HAM7J3BLI3M44PCR6M52FN6ZQ65IEZ6TOSHJURSBO2PPA
 at hudson.remoting.Channel@47c318f0:JNLP4-connect connection from 
gelman-group-win.stat.columbia.edu/128.59.76.64:50229
        at hudson.FilePath.act(FilePath.java:1005)
        at hudson.FilePath.act(FilePath.java:987)
        at hudson.FilePath.deleteRecursive(FilePath.java:1192)
        at 
org.jenkinsci.plugins.workflow.steps.DeleteDirStep$Execution.run(DeleteDirStep.java:77)
        at 
org.jenkinsci.plugins.workflow.steps.DeleteDirStep$Execution.run(DeleteDirStep.java:69)
        at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1$1.call(SynchronousNonBlockingStepExecution.java:49)
        at hudson.security.ACL.impersonate(ACL.java:290)
        at 
org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution$1.run(SynchronousNonBlockingStepExecution.java:46)
        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
        at java.util.concurrent.FutureTask.run(FutureTask.java:266)
        at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
        at java.lang.Thread.run(Thread.java:748)

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