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https://issues.apache.org/jira/browse/ARROW-14371?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17431192#comment-17431192
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Jonathan Keane commented on ARROW-14371:
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I might be misinterpreting this, but I read that as: there was an error looking
for and finding numpy include directories and that's the error (even though it
sounds like it's just Python3 that's not being found). Could you try brew
installing numpy and see if that fixes it?
> [R] Improve the R-only development guide
> ----------------------------------------
>
> Key: ARROW-14371
> URL: https://issues.apache.org/jira/browse/ARROW-14371
> Project: Apache Arrow
> Issue Type: Improvement
> Components: R
> Environment: MacBook Pro (13-inch, 2018, Four Thunderbolt 3 Ports)
> running macOS BigSur (11.6)
> Reporter: Dragoș Moldovan-Grünfeld
> Priority: Major
> Labels: documentation
> Attachments: arrow_install_error
>
>
> There are a few ways we could make the R-only development guide better (this
> list isn't exhaustive, but are things that have come up in the discussion
> here):
> * A note that the brew-based method and the build-your-own methods are
> incompatible (mostly because of {{ARROW_HOME}}, but folks using brew
> shouldn't need to even think about that, so we should be careful how we
> phrase this)
> * A note about confirming that {{brew install apache-arrow --HEAD}} completes
> successfully and how to confirm it's being picked up in the install process
> * This might be part of the point above, but a description of what the
> difference/meaning of the following are: {{*** Using Homebrew
> ${PKG_BREW_NAME}}}, {{*** Arrow C++ libraries found via pkg-config}}, any
> mention of {{autobrew}}. Specifically, if one is trying to use homebrew for
> development, only the first one is ok, if someone sees something else that
> means that something isn't quite right.
> Original ticket description:
> I cannot get a working install using the [R-only development
> instructions|https://arrow.apache.org/docs/r/articles/developing.html#r-only-development].
>
> Steps I took:
> 1. run brew install apache-arrow --HEAD
> 2. run unset ARROW_HOME
> 3. clone arrow repo
> 4. navigate to arrow/r
> 5. run R CMD INSTALL .
> {code:r}
> (base) dragos@Dragoss-MacBook-Pro r % R CMD INSTALL .
> * installing to library
> ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’
> * installing *source* package ‘arrow’ ...
> ** using staged installation
> *** Arrow C++ libraries found via pkg-config at
> **** Warning: library version mismatch
> **** C++ is 5.0.0 but R is 5.0.0.9000
> **** If installation fails, upgrade the C++ library to match
> **** or retry with ARROW_USE_PKG_CONFIG=false
> PKG_CFLAGS=-I/usr/local/Cellar/apache-arrow/5.0.0_2/include
> -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET
> -DARROW_R_WITH_JSON
> PKG_LIBS=-L/usr/local/Cellar/apache-arrow/5.0.0_2/lib -larrow_dataset
> -lparquet -larrow
> ** libs
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c RTasks.cpp
> -o RTasks.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c altrep.cpp
> -o altrep.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c array.cpp
> -o array.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> array_to_vector.cpp -o array_to_vector.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> arraydata.cpp -o arraydata.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> arrowExports.cpp -o arrowExports.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c buffer.cpp
> -o buffer.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> chunkedarray.cpp -o chunkedarray.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> compression.cpp -o compression.o
> clang++ -mmacosx-version-min=10.13 -std=gnu++11
> -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG
> -I/usr/local/Cellar/apache-arrow/5.0.0_2/include -DARROW_R_WITH_ARROW
> -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_JSON
> -I../inst/include/ -I/usr/local/include -fPIC -Wall -g -O2 -c
> compute-exec.cpp -o compute-exec.o
> compute-exec.cpp:25:10: fatal error: 'arrow/compute/exec/options.h' file not
> found
> #include <arrow/compute/exec/options.h>
> ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> 1 error generated.
> make: *** [compute-exec.o] Error 1
> ERROR: compilation failed for package ‘arrow’
> * removing
> ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library/arrow’
> {code}
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