Hans-Martin von Gaudecker created ARROW-17576:
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Summary: conda r-arrow Linux package has
Key: ARROW-17576
URL: https://issues.apache.org/jira/browse/ARROW-17576
Project: Apache Arrow
Issue Type: Bug
Components: R
Affects Versions: 9.0.0
Environment: Ubuntu 20.04
conda 4.13.0 py39hf3d152e_1 conda-forge
Environment created based on attached script:
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
abseil-cpp 20211102.0 h27087fc_1 conda-forge
arrow-cpp 9.0.0 py310h893e394_0_cpu conda-forge
aws-c-cal 0.5.11 h95a6274_0 conda-forge
aws-c-common 0.6.2 h7f98852_0 conda-forge
aws-c-event-stream 0.2.7 h3541f99_13 conda-forge
aws-c-io 0.10.5 hfb6a706_0 conda-forge
aws-checksums 0.1.11 ha31a3da_7 conda-forge
aws-sdk-cpp 1.8.186 hb4091e7_3 conda-forge
binutils_impl_linux-64 2.36.1 h193b22a_2 conda-forge
bwidget 1.9.14 ha770c72_1 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.18.1 h7f98852_0 conda-forge
ca-certificates 2022.6.15 ha878542_0 conda-forge
cairo 1.16.0 ha61ee94_1013 conda-forge
curl 7.83.1 h7bff187_0 conda-forge
expat 2.4.8 h27087fc_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.14.0 h8e229c2_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.12.1 hca18f0e_0 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
gcc_impl_linux-64 12.1.0 hea43390_16 conda-forge
gettext 0.19.8.1 h73d1719_1008 conda-forge
gflags 2.2.2 he1b5a44_1004 conda-forge
gfortran_impl_linux-64 12.1.0 h1db8e46_16 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
grpc-cpp 1.46.3 hbd84cd8_3 conda-forge
gsl 2.7 he838d99_0 conda-forge
gxx_impl_linux-64 12.1.0 hea43390_16 conda-forge
harfbuzz 5.1.0 hf9f4e7c_0 conda-forge
icu 70.1 h27087fc_0 conda-forge
jpeg 9e h166bdaf_2 conda-forge
kernel-headers_linux-64 2.6.32 he073ed8_15 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
krb5 1.19.3 h3790be6_0 conda-forge
ld_impl_linux-64 2.36.1 hea4e1c9_2 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libblas 3.9.0 16_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h166bdaf_7 conda-forge
libbrotlidec 1.0.9 h166bdaf_7 conda-forge
libbrotlienc 1.0.9 h166bdaf_7 conda-forge
libcblas 3.9.0 16_linux64_openblas conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcurl 7.83.1 h7bff187_0 conda-forge
libdeflate 1.13 h166bdaf_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 h9b69904_4 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc-devel_linux-64 12.1.0 h1ec3361_16 conda-forge
libgcc-ng 12.1.0 h8d9b700_16 conda-forge
libgfortran-ng 12.1.0 h69a702a_16 conda-forge
libgfortran5 12.1.0 hdcd56e2_16 conda-forge
libglib 2.72.1 h2d90d5f_0 conda-forge
libgomp 12.1.0 h8d9b700_16 conda-forge
libgoogle-cloud 1.40.2 hefc27d0_0 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.9.0 16_linux64_openblas conda-forge
libnghttp2 1.47.0 hdcd2b5c_1 conda-forge
libnsl 2.0.0 h7f98852_0 conda-forge
libopenblas 0.3.21 pthreads_h78a6416_2 conda-forge
libpng 1.6.37 h753d276_4 conda-forge
libprotobuf 3.20.1 h6239696_1 conda-forge
libsanitizer 12.1.0 ha89aaad_16 conda-forge
libsqlite 3.39.2 h753d276_1 conda-forge
libssh2 1.10.0 haa6b8db_3 conda-forge
libstdcxx-devel_linux-64 12.1.0 h1ec3361_16 conda-forge
libstdcxx-ng 12.1.0 ha89aaad_16 conda-forge
libthrift 0.16.0 h519c5ea_1 conda-forge
libtiff 4.4.0 h0e0dad5_3 conda-forge
libutf8proc 2.7.0 h7f98852_0 conda-forge
libuuid 2.32.1 h7f98852_1000 conda-forge
libwebp-base 1.2.4 h166bdaf_0 conda-forge
libxcb 1.13 h7f98852_1004 conda-forge
libxml2 2.9.14 h22db469_4 conda-forge
libzlib 1.2.12 h166bdaf_2 conda-forge
lz4-c 1.9.3 h9c3ff4c_1 conda-forge
make 4.3 hd18ef5c_1 conda-forge
ncurses 6.3 h27087fc_1 conda-forge
numpy 1.23.2 py310h53a5b5f_0 conda-forge
openssl 1.1.1q h166bdaf_0 conda-forge
orc 1.7.5 h6c59b99_0 conda-forge
pango 1.50.9 hc4f8a73_0 conda-forge
pcre 8.45 h9c3ff4c_0 conda-forge
pcre2 10.37 hc3806b6_1 conda-forge
pip 22.2.2 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
python 3.10.6 h582c2e5_0_cpython conda-forge
python_abi 3.10 2_cp310 conda-forge
r-arrow 9.0.0 r41h27087fc_0 conda-forge
r-assertthat 0.2.1 r41hc72bb7e_2 conda-forge
r-base 4.1.3 ha8c3e7c_2 conda-forge
r-bit 4.0.4 r41hcfec24a_0 conda-forge
r-bit64 4.0.5 r41hcfec24a_0 conda-forge
r-cli 3.3.0 r41h7525677_0 conda-forge
r-ellipsis 0.3.2 r41hcfec24a_0 conda-forge
r-glue 1.6.2 r41h06615bd_0 conda-forge
r-magrittr 2.0.3 r41h06615bd_0 conda-forge
r-purrr 0.3.4 r41hcfec24a_1 conda-forge
r-r6 2.5.1 r41hc72bb7e_0 conda-forge
r-rlang 1.0.4 r41h7525677_0 conda-forge
r-tidyselect 1.1.2 r41hc72bb7e_0 conda-forge
r-vctrs 0.4.1 r41h7525677_0 conda-forge
re2 2022.06.01 h27087fc_0 conda-forge
readline 8.1.2 h0f457ee_0 conda-forge
s2n 1.0.10 h9b69904_0 conda-forge
sed 4.8 he412f7d_0 conda-forge
setuptools 65.3.0 pyhd8ed1ab_1 conda-forge
snappy 1.1.9 hbd366e4_1 conda-forge
sysroot_linux-64 2.12 he073ed8_15 conda-forge
tk 8.6.12 h27826a3_0 conda-forge
tktable 2.10 hb7b940f_3 conda-forge
tzdata 2022c h191b570_0 conda-forge
wheel 0.37.1 pyhd8ed1ab_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h7f98852_0 conda-forge
xorg-libsm 1.2.3 hd9c2040_1000 conda-forge
xorg-libx11 1.7.2 h7f98852_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h7f98852_1 conda-forge
xorg-libxrender 0.9.10 h7f98852_1003 conda-forge
xorg-libxt 1.2.1 h7f98852_2 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h7f98852_1002 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
zlib 1.2.12 h166bdaf_2 conda-forge
zstd 1.5.2 h6239696_4 conda-forge
Reporter: Hans-Martin von Gaudecker
Attachments: environment.yml
I need to read parquet files in R using a conda environment. Works great on
Windows, but on Linux, r-arrow comes without some core features. If this is
expected, it would be great to flag it in the docs, at least for me, reading
through
[https://arrow.apache.org/docs/r/articles/install.html#method-1a---binary-r-package-containing-libarrow-binary-via-rspmconda]
gives the impression that I need not worry about features (though pinning
r-arrow to 8.0.1 gives a complete version lacking only lzo-support).
After creating an environment based on the attached specification:
{{{}(test-r-arrow) x@x/test-r-arrow$ R{}}}{{{}R version 4.1.3 (2022-03-10) --
"One Push-Up"{}}}
{{Copyright (C) 2022 The R Foundation for Statistical Computing}}
{{Platform: x86_64-conda-linux-gnu (64-bit)}}
{{R is free software and comes with ABSOLUTELY NO WARRANTY.}}
{{You are welcome to redistribute it under certain conditions.}}
{{Type 'license()' or 'licence()' for distribution details.}}{{ }}
{{Natural language support but running in an English locale}}
{{R is a collaborative project with many contributors.}}
{{Type 'contributors()' for more information and}}
{{'citation()' on how to cite R or R packages in publications.}}
{{Type 'demo()' for some demos, 'help()' for on-line help, or}}
{{'help.start()' for an HTML browser interface to help.}}
{{Type 'q()' to quit R.}}
{{> library(arrow)}}
{{Some features are not enabled in this build of Arrow. Run `arrow_info()` for
more information.}}
{{Attaching package: ‘arrow’}}
{{The following object is masked from ‘package:utils’:}}{{ timestamp}}
{{> arrow_info()}}
{{Arrow package version: 9.0.0}}
{{Capabilities:}}
{{ }}
{{dataset FALSE}}
{{substrait FALSE}}
{{parquet FALSE}}
{{json FALSE}}
{{s3 FALSE}}
{{gcs FALSE}}
{{utf8proc TRUE}}
{{re2 TRUE}}
{{snappy TRUE}}
{{gzip TRUE}}
{{brotli TRUE}}
{{zstd TRUE}}
{{lz4 TRUE}}
{{lz4_frame TRUE}}
{{lzo FALSE}}
{{bz2 TRUE}}
{{jemalloc TRUE}}
{{mimalloc TRUE}}
{{To reinstall with more optional capabilities enabled, see}}
{{{} https://arrow.apache.org/docs/r/articles/install.html{}}}{{{}Memory:{}}}
{{ }}
{{Allocator jemalloc}}
{{Current 0 bytes}}
{{{}Max 0 bytes{}}}{{{}Runtime:{}}}
{{ }}
{{SIMD Level avx2}}
{{{}Detected SIMD Level avx2{}}}{{{}Build:{}}}
{{ }}
{{C++ Library Version 9.0.0}}
{{C++ Compiler GNU}}
{{C++ Compiler Version 10.4.0}}
{{Git ID 13127e16b858dda3b8299a1e435c3c0ba5934fdc}}
Creating the same environment on Windows produces:
{{> arrow_info()}}
{{Arrow package version: 9.0.0}}
{{Capabilities:}}
{{dataset TRUE}}
{{substrait FALSE}}
{{parquet TRUE}}
{{json TRUE}}
{{s3 TRUE}}
{{gcs FALSE}}
{{utf8proc TRUE}}
{{re2 TRUE}}
{{snappy TRUE}}
{{gzip TRUE}}
{{brotli TRUE}}
{{zstd TRUE}}
{{lz4 TRUE}}
{{lz4_frame TRUE}}
{{lzo FALSE}}
{{bz2 TRUE}}
{{jemalloc FALSE}}
{{mimalloc TRUE}}
{{Arrow options():}}
{{arrow.use_threads FALSE}}
{{{}Memory:{}}}{{{}Allocator mimalloc{}}}
{{Current 0 bytes}}
{{Max 0 bytes}}
{{Runtime:}}
{{SIMD Level avx2}}
{{Detected SIMD Level avx2}}
{{Build:}}
{{C++ Library Version 9.0.0}}
{{C++ Compiler MSVC}}
{{C++ Compiler Version 19.16.27048.0}}
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