[
https://issues.apache.org/jira/browse/ARROW-17474?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Miles Granger closed ARROW-17474.
---------------------------------
Resolution: Cannot Reproduce
> Pandas read_parquet failr on pyarrow level
> ------------------------------------------
>
> Key: ARROW-17474
> URL: https://issues.apache.org/jira/browse/ARROW-17474
> Project: Apache Arrow
> Issue Type: Bug
> Components: Parquet
> Environment: Fedora 33
> Reporter: Amir Aliev
> Priority: Minor
>
> When reading any of the set of parquet files in pandas with pyarrow parquet
> engine I am getting "terminate called without an active exception | Aborted
> (core dumped)" error with a 50% chance. I have run this through gdb for the
> following backtrace:
>
> #0 0x00007ffff7ad69d5 in raise () from /lib64/libc.so.6
> #1 0x00007ffff7abf8a4 in abort () from /lib64/libc.so.6
> #2 0x00007fffe6c68926 in __gnu_cxx::__verbose_terminate_handler() [clone
> .cold] () from /lib64/libstdc++.so.6
> #3 0x00007fffe6c741ac in __cxxabiv1::__terminate(void (*)()) () from
> /lib64/libstdc++.so.6
> #4 0x00007fffe6c74217 in std::terminate() () from /lib64/libstdc++.so.6
> #5 0x00007fffe6c73bcc in __gxx_personality_v0 () from /lib64/libstdc++.so.6
> #6 0x00007ffff497dd94 in _Unwind_ForcedUnwind_Phase2 () from
> /lib64/libgcc_s.so.1
> #7 0x00007ffff497e482 in _Unwind_ForcedUnwind () from /lib64/libgcc_s.so.1
> #8 0x00007ffff7a89c26 in __pthread_unwind () from /lib64/libpthread.so.0
> #9 0x00007ffff7a816a2 in pthread_exit () from /lib64/libpthread.so.0
> #10 0x00007ffff7b1f34a in pthread_exit () from /lib64/libc.so.6
> #11 0x00007ffff7e3657b in PyThread_exit_thread () from
> /lib64/libpython3.9.so.1.0
> #12 0x00007ffff7cc5a8d in take_gil.cold () from /lib64/libpython3.9.so.1.0
> #13 0x00007ffff7d8f656 in PyEval_RestoreThread () from
> /lib64/libpython3.9.so.1.0
> #14 0x00007ffff7e68480 in PyGILState_Ensure () from /lib64/libpython3.9.so.1.0
> #15 0x00007fffe6f000e3 in std::_Sp_counted_ptr<arrow::py::PyBuffer*,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_python.so.900
> #16 0x00007fffe7519c4a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #17 0x00007fffe751badd in arrow::Future<std::shared_ptr<arrow::Buffer>
> >::SetResult(arrow::Result<std::shared_ptr<arrow::Buffer>
> >)::\{lambda(void*)#1}::_FUN(void*) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #18 0x00007fffe8085929 in arrow::ConcreteFutureImpl::~ConcreteFutureImpl() ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #19 0x00007fffe811da3a in arrow::io::internal::ReadRangeCache::Impl::~Impl()
> () from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #20 0x00007fffe6643eda in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #21 0x00007fffe66ec05e in parquet::ParquetFileReader::~ParquetFileReader() ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #22 0x00007fffe676b98a in parquet::arrow::(anonymous
> namespace)::FileReaderImpl::~FileReaderImpl() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #23 0x00007fffe6643eda in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #24 0x00007fffe67c950a in
> std::_Function_handler<arrow::Future<std::function<arrow::Future<std::shared_ptr<arrow::RecordBatch>
> > ()> > (), parquet::arrow::RowGroupGenerator>::_M_manager(std::_Any_data&,
> std::_Any_data const&, std::_Manager_operation) ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #25 0x00007fffe67bbe8e in
> std::_Sp_counted_ptr_inplace<arrow::MergedGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State,
> std::allocator<arrow::MergedGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #26 0x00007fffe6643eda in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #27 0x00007fffe67ba122 in
> std::_Function_handler<arrow::Future<std::shared_ptr<arrow::RecordBatch> >
> (), arrow::MergedGenerator<std::shared_ptr<arrow::RecordBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libparquet.so.900
> #28 0x00007fffdf126209 in
> std::_Sp_counted_ptr_inplace<arrow::dataset::SlicingGenerator::State,
> std::allocator<arrow::dataset::SlicingGenerator::State>,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #29 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #30 0x00007fffdf127392 in
> std::_Function_handler<arrow::Future<std::shared_ptr<arrow::RecordBatch> >
> (), arrow::dataset::SlicingGenerator>::_M_manager(std::_Any_data&,
> std::_Any_data const&, std::_Manager_operation) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #31 0x00007fffdf11b56a in
> std::_Sp_counted_ptr_inplace<arrow::SerialReadaheadGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State,
> std::allocator<arrow::SerialReadaheadGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #32 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #33 0x00007fffdf126732 in
> std::_Function_handler<arrow::Future<std::shared_ptr<arrow::RecordBatch> >
> (), arrow::SerialReadaheadGenerator<std::shared_ptr<arrow::RecordBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #34 0x00007fffdf128ae6 in
> arrow::Future<std::function<arrow::Future<std::shared_ptr<arrow::RecordBatch>
> > ()>
> >::SetResult(arrow::Result<std::function<arrow::Future<std::shared_ptr<arrow::RecordBatch>
> > ()> >)::\{lambda(void*)#1}::_FUN(void*) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #35 0x00007fffe8085929 in arrow::ConcreteFutureImpl::~ConcreteFutureImpl() ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #36 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #37 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #38 0x00007fffdf1267e2 in
> std::_Function_handler<arrow::Future<std::shared_ptr<arrow::RecordBatch> >
> (), arrow::FutureFirstGenerator<std::shared_ptr<arrow::RecordBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #39 0x00007fffdf1261d9 in
> std::_Sp_counted_ptr_inplace<arrow::DefaultIfEmptyGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State,
> std::allocator<arrow::DefaultIfEmptyGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #40 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #41 0x00007fffdf127232 in
> std::_Function_handler<arrow::Future<std::shared_ptr<arrow::RecordBatch> >
> (), arrow::DefaultIfEmptyGenerator<std::shared_ptr<arrow::RecordBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #42 0x00007fffdf1261a9 in
> std::_Sp_counted_ptr_inplace<arrow::EnumeratingGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State,
> std::allocator<arrow::EnumeratingGenerator<std::shared_ptr<arrow::RecordBatch>
> >::State>, (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #43 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #44 0x00007fffdf127182 in
> std::_Function_handler<arrow::Future<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> > > (), arrow::EnumeratingGenerator<std::shared_ptr<arrow::RecordBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #45 0x00007fffdf128a26 in
> arrow::Future<std::function<arrow::Future<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> > > ()>
> >::SetResult(arrow::Result<std::function<arrow::Future<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> > > ()> >)::\{lambda(void*)#1}::_FUN(void*) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #46 0x00007fffe8085929 in arrow::ConcreteFutureImpl::~ConcreteFutureImpl() ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #47 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #48 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #49 0x00007fffdf1270d2 in
> std::_Function_handler<arrow::Future<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> > > (),
> arrow::FutureFirstGenerator<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> > > >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #50 0x00007fffdf14a6dd in
> std::_Sp_counted_ptr_inplace<arrow::MappingGenerator<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> >, arrow::dataset::EnumeratedRecordBatch>::State,
> std::allocator<arrow::MappingGenerator<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> >, arrow::dataset::EnumeratedRecordBatch>::State>,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #51 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #52 0x00007fffdf127022 in
> std::_Function_handler<arrow::Future<arrow::dataset::EnumeratedRecordBatch>
> (),
> arrow::MappingGenerator<arrow::Enumerated<std::shared_ptr<arrow::RecordBatch>
> >, arrow::dataset::EnumeratedRecordBatch> >::_M_manager(std::_Any_data&,
> std::_Any_data const&, std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #53 0x00007fffdf12cd1e in
> std::_Sp_counted_ptr_inplace<arrow::MergedGenerator<arrow::dataset::EnumeratedRecordBatch>::State,
>
> std::allocator<arrow::MergedGenerator<arrow::dataset::EnumeratedRecordBatch>::State>,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #54 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #55 0x00007fffdf1269f2 in
> std::_Function_handler<arrow::Future<arrow::dataset::EnumeratedRecordBatch>
> (), arrow::MergedGenerator<arrow::dataset::EnumeratedRecordBatch>
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #56 0x00007fffdf14a5e2 in
> std::_Sp_counted_ptr_inplace<arrow::ReadaheadGenerator<arrow::dataset::EnumeratedRecordBatch>::State,
>
> std::allocator<arrow::ReadaheadGenerator<arrow::dataset::EnumeratedRecordBatch>::State>,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #57 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #58 0x00007fffdf126942 in
> std::_Function_handler<arrow::Future<arrow::dataset::EnumeratedRecordBatch>
> (), arrow::ReadaheadGenerator<arrow::dataset::EnumeratedRecordBatch>
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) ()
> from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #59 0x00007fffdf12ba28 in
> std::_Sp_counted_ptr_inplace<arrow::MappingGenerator<arrow::dataset::EnumeratedRecordBatch,
> nonstd::optional_lite::optional<arrow::compute::ExecBatch> >::State,
> std::allocator<arrow::MappingGenerator<arrow::dataset::EnumeratedRecordBatch,
> nonstd::optional_lite::optional<arrow::compute::ExecBatch> >::State>,
> (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #60 0x00007fffdf26493a in
> std::_Sp_counted_base<(__gnu_cxx::_Lock_policy)2>::_M_release() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/_dataset.cpython-39-x86_64-linux-gnu.so
> #61 0x00007fffdf126892 in
> std::_Function_handler<arrow::Future<nonstd::optional_lite::optional<arrow::compute::ExecBatch>
> > (), arrow::MappingGenerator<arrow::dataset::EnumeratedRecordBatch,
> nonstd::optional_lite::optional<arrow::compute::ExecBatch> >
> >::_M_manager(std::_Any_data&, std::_Any_data const&,
> std::_Manager_operation) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #62 0x00007fffe7e805db in arrow::compute::(anonymous
> namespace)::SourceNode::~SourceNode() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #63 0x00007fffe7f355e3 in arrow::compute::(anonymous
> namespace)::ExecPlanImpl::~ExecPlanImpl() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #64 0x00007fffe7f35a52 in std::_Sp_counted_ptr<arrow::compute::(anonymous
> namespace)::ExecPlanImpl*, (__gnu_cxx::_Lock_policy)2>::_M_dispose() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #65 0x00007fffdf0f0a32 in arrow::internal::FnOnce<void (arrow::FutureImpl
> const&)>::FnImpl<arrow::Future<arrow::internal::Empty>::WrapStatusyOnComplete::Callback<arrow::dataset::(anonymous
>
> namespace)::AsyncScanner::ScanBatchesUnorderedAsync(arrow::internal::Executor*,
> bool, bool)::\{lambda(...)#1}::operator()(...)
> const::\{lambda()#1}::operator()() const::\{lambda(arrow::Status const&)#1}>
> >::~FnImpl() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow_dataset.so.900
> #66 0x00007fffe808a416 in
> arrow::ConcreteFutureImpl::DoMarkFinishedOrFailed(arrow::FutureState) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #67 0x00007fffe75b33ff in void
> arrow::Future<arrow::internal::Empty>::MarkFinished<arrow::internal::Empty,
> void>(arrow::Status) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #68 0x00007fffe7f16f25 in arrow::internal::FnOnce<void (arrow::FutureImpl
> const&)>::FnImpl<arrow::Future<arrow::internal::Empty>::WrapStatusyOnComplete::Callback<arrow::compute::(anonymous
> namespace)::ExecPlanImpl::EndTaskGroup()::\{lambda(arrow::Status const&)#1}>
> >::invoke(arrow::FutureImpl const&) ()
> from /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #69 0x00007fffe808a408 in
> arrow::ConcreteFutureImpl::DoMarkFinishedOrFailed(arrow::FutureState) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #70 0x00007fffe75b33ff in void
> arrow::Future<arrow::internal::Empty>::MarkFinished<arrow::internal::Empty,
> void>(arrow::Status) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #71 0x00007fffe80cf46b in arrow::internal::FnOnce<void (arrow::FutureImpl
> const&)>::FnImpl<arrow::Future<arrow::internal::Empty>::WrapStatusyOnComplete::Callback<arrow::util::AsyncTaskGroup::AddTaskUnlocked(arrow::Future<arrow::internal::Empty>
> const&, arrow::util::Mutex::Guard)::\{lambda(arrow::Status const&)#1}>
> >::invoke(arrow::FutureImpl const&) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #72 0x00007fffe808a408 in
> arrow::ConcreteFutureImpl::DoMarkFinishedOrFailed(arrow::FutureState) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #73 0x00007fffe75b33ff in void
> arrow::Future<arrow::internal::Empty>::MarkFinished<arrow::internal::Empty,
> void>(arrow::Status) () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #74 0x00007fffe7f3a5cd in arrow::internal::FnOnce<void
> ()>::FnImpl<std::_Bind<arrow::detail::ContinueFuture
> (arrow::Future<arrow::internal::Empty>, std::function<arrow::Status ()>)>
> >::invoke() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #75 0x00007fffe8066e7b in
> std::thread::_State_impl<std::thread::_Invoker<std::tuple<arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::\{lambda()#1}>
> > >::_M_run() () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #76 0x00007fffe8f7d5f0 in execute_native_thread_routine () from
> /home/inc/.local/lib/python3.9/site-packages/pyarrow/libarrow.so.900
> #77 0x00007ffff7a803f9 in start_thread () from /lib64/libpthread.so.0
> #78 0x00007ffff7b9ab53 in clone () from /lib64/libc.so.6
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