Revision: 5215
Author: nicove
Date: 2006-06-10 09:57:41 -0700 (Sat, 10 Jun 2006)
ViewCVS: http://svn.sourceforge.net/jmol/?rev=5215&view=rev
Log Message:
-----------
Fah
Modified Paths:
--------------
trunk/Jmol-web/build.xml
trunk/Jmol-web/cache.properties
trunk/Jmol-web/source/doc/fah/fah-projects.xml
Modified: trunk/Jmol-web/build.xml
===================================================================
--- trunk/Jmol-web/build.xml 2006-06-10 16:48:47 UTC (rev 5214)
+++ trunk/Jmol-web/build.xml 2006-06-10 16:57:41 UTC (rev 5215)
@@ -112,6 +112,13 @@
out="${build.html}/fah/missingProjects.txt">
</style>
+ <!-- Create list of available Jmol-fah projects -->
+ <style
+ style="${doc.dir}/fah/createAvailableProjectList.xsl"
+ in="${doc.dir}/fah/fah-projects.xml"
+ out="${build.html}/fah/availableProjects.txt">
+ </style>
+
<!-- Replace paths -->
<replace dir="${build.html}" includes="*.html">
<replacefilter token="[images]" value="images" />
Modified: trunk/Jmol-web/cache.properties
===================================================================
--- trunk/Jmol-web/cache.properties 2006-06-10 16:48:47 UTC (rev 5214)
+++ trunk/Jmol-web/cache.properties 2006-06-10 16:57:41 UTC (rev 5215)
@@ -190,22 +190,23 @@
download/index.fr.html=d81c4ea41856fac55e311ebbe6103651
download/index.nl.html=60c14c2d5c934e3c576b4d47d3835733
fah/FAHlogoButton.jpg=7c3af4cc2f5a35c1a063ae8115e1dc4f
-fah/createProjectList.js=ad25f97e3c4a8afc45654b6bbed41924
-fah/fah-projects.xml=fe023916638cf0a370f503b231658e20
+fah/availableProjects.txt=f428ae06ffad6c29645a75bf5baa5df7
+fah/createProjectList.js=702fb5e0bb3d6915fdeb1e78b10bff36
+fah/fah-projects.xml=c4be983906e421710fb89c95e1388fc3
fah/fah-projects.xsd=0820c1b3ef9ea3dcc35044256fed93f1
fah/fah.js=d491b1b328a287e273a5382559df353a
-fah/index.de.html=7c5ec6f505e590160ce8b390db7126a3
-fah/index.en.html=82397b22486172f4ae08ae89384d7724
-fah/index.es.html=a9d839d7774ab11e2f255c61fcdf5f50
-fah/index.et.html=8e13999a22ce44111e74fc5a16e0e8b3
-fah/index.fr.html=872fd4fc77aee0bcb8ca05d5a993bcc4
-fah/index.hu.html=550188a32f09490e4830e40f3551d7b3
-fah/index.it.html=2363e6951d44a0aae2dab59288a68c74
-fah/index.nl.html=67e9a694068e680c55fc6aba1cef738c
-fah/index.pt.html=993babf09764d78232cd4cf628b41540
-fah/index.pt_BR.html=ee5cbfc28198c2ac88f829348b085188
-fah/index.ro.html=00c95f50d35e4f0766c5b6fcc542847e
-fah/missingProjects.txt=021ee8b24e6fe684a15550e827381bb1
+fah/index.de.html=4c1f0ae447056d7dce2a0f347fa20c7c
+fah/index.en.html=c9c72aca400e257f5b323721e16066ee
+fah/index.es.html=0a68f513cbf14e6fdf58ba8d88b0165b
+fah/index.et.html=cec97726faa642164b7b10fc2970ee3c
+fah/index.fr.html=da0ad2b45d8f2034102961ccae241ee5
+fah/index.hu.html=d08cc1af1e2e1c0e125772bd4f9bde37
+fah/index.it.html=ab0b60190ce851c0902c8d67d8a19b9b
+fah/index.nl.html=444a5d8237b0ff9ddf40c5ab4df19be6
+fah/index.pt.html=42bc39384e7b089a7870361224557560
+fah/index.pt_BR.html=e969dbf7c566c25efc35f97ed1487aa9
+fah/index.ro.html=6e52f966f6d970e2088afa9d9f300e8e
+fah/missingProjects.txt=d92367b53e2419d5ed7a1b66a576f2c6
fah/projects/p1001.xyz.gz=f092439792dc8f05d1e143264bdd14ee
fah/projects/p1002.xyz.gz=9327be24296aa7f57a644d2818e3adfd
fah/projects/p1003.xyz.gz=a289bb591c322a7deee0a3a48433b842
@@ -493,6 +494,7 @@
fah/projects/p1477.xyz.gz=26d6ea109b8d2d77da1e0cbac0c2607c
fah/projects/p1478.xyz.gz=99904b7e4b0d20b3dc02a88b4b0b62bf
fah/projects/p1479.xyz.gz=38143b8bb34979329286d6ec2125b61b
+fah/projects/p1480.xyz.gz=cecd7754e95fb127364b84759048fa8a
fah/projects/p1481.xyz.gz=f5ae96d16740bec31c6f8937dcef05d1
fah/projects/p1482.xyz.gz=be6c2363e6225db8fd86cdc8c15a6591
fah/projects/p1485.xyz.gz=762946c813e50ace9ea84feacba9cfcc
@@ -503,6 +505,7 @@
fah/projects/p1490.xyz.gz=13e40eae26a45a9e144f8f21f3500591
fah/projects/p1491.xyz.gz=61ff2444ed4b32a585d872420cade9cd
fah/projects/p1492.xyz.gz=035810f6bc8d3f226d8432ef3850fffd
+fah/projects/p1493.xyz.gz=3ce577220cd89b8c64ea502ba60edebd
fah/projects/p1500.xyz.gz=5dcd89d66f30d79c1addf450504484b3
fah/projects/p1501.xyz.gz=4744533aff6fcc8ec741eca6c3f73c98
fah/projects/p1502.xyz.gz=cbb869cbbe5ce74f3801a7b1e5afe489
@@ -642,6 +645,9 @@
fah/projects/p1807.xyz.gz=92e443fedd7a490b1e9d20ccb5bb4542
fah/projects/p1808.xyz.gz=d4100ddc9975d7ff2f032091b2474928
fah/projects/p1809.xyz.gz=87cc5f3d4ebd9acd174371ac6b4f4a18
+fah/projects/p1811.xyz.gz=5e0d7b23d42cb88b18812e02ec4cfc4b
+fah/projects/p1812.xyz.gz=962774ae81390f197d282cb631607556
+fah/projects/p1813.xyz.gz=84419c8e039a2d0930419ae3c96968e5
fah/projects/p182.xyz.gz=0734f00f632fa47364b2b2c118a157b7
fah/projects/p183.xyz.gz=bc6c9946855714c14b4ad4cd8c3cc37f
fah/projects/p184.xyz.gz=6c2f89f747861f2edeff46d4c16bf441
@@ -649,6 +655,7 @@
fah/projects/p1850.xyz.gz=519e7504e018b5362923cdedaf4ee8af
fah/projects/p1851.xyz.gz=794c4d71dae3064cf8381eab1dc28c9f
fah/projects/p186.xyz.gz=c08c97f84a8a831fd0e7ae778fccca15
+fah/projects/p1861.xyz.gz=bce18db934626c69493bdd6d9dd7fd76
fah/projects/p187.xyz.gz=f1e6ecce7d78a98b51f926f3248292f4
fah/projects/p188.xyz.gz=ff37a218b840220838a90275dffd7df8
fah/projects/p189.xyz.gz=12ad681bd57e1ae068a8a1dc5acbed7c
@@ -783,9 +790,12 @@
fah/projects/p2116.xyz.gz=af974ed119ca15dff588953fbedae2c2
fah/projects/p2117.xyz.gz=0faced12b49eea18550dda7dc8bf6b27
fah/projects/p2118.xyz.gz=bb31c0960651bbe8897de828c1f880dc
+fah/projects/p2119.xyz.gz=7bbfeb181f91d3388aec277f4a432f89
fah/projects/p212.xyz.gz=0a2be73f860545db8e2fcd6c9073bdbe
fah/projects/p2120.xyz.gz=78c667ba527a60728912642cffc6f8e9
+fah/projects/p2121.xyz.gz=eb8916f765374ca4e3bb9cf2cdaf491f
fah/projects/p2122.xyz.gz=d919631d7f2e5595d0738427698a774d
+fah/projects/p2123.xyz.gz=cf7384f45d09b739137b22ee90db7572
fah/projects/p213.xyz.gz=945606ff1301ca6f22662cecde96b7e4
fah/projects/p214.xyz.gz=1830e3f65d7259c7852bef361702aa2e
fah/projects/p215.xyz.gz=76d17ff2b5aeb0ed6fe71da94ebfcf4a
@@ -902,7 +912,9 @@
fah/projects/p2505.xyz.gz=ba7c341c7a9919be9a723eea737409f3
fah/projects/p2506.xyz.gz=235bdc9a80de8ff302f5fac8de39a86e
fah/projects/p2507.xyz.gz=d925f32e3f81cf081e272d78f242a377
+fah/projects/p2509.xyz.gz=962c92e81abc2b3f3bdab66c36fdebd4
fah/projects/p251.xyz.gz=b7f92b522da81e9edaac3f3717961d0e
+fah/projects/p2510.xyz.gz=4eed71e9e38cf878094826211e50fa50
fah/projects/p252.xyz.gz=ffd493c172ebb620631d1b29ec2e3322
fah/projects/p253.xyz.gz=d9402dace3aef5c4b496e92b7fe82d44
fah/projects/p254.xyz.gz=a155ef4eb9593728052246a10c32d0ab
@@ -1318,6 +1330,7 @@
fah/projects/p991.xyz.gz=afb97fe317cfd1c09fca39d0f7d75b45
fah/projects/p992.xyz.gz=c3bab9f405422f4b3077ec5f79358213
fah/projects/p993.xyz.gz=898d302485ce0c1709cc05606c9d342d
+fah/projects/p994.xyz.gz=b636d972668e9e07642442ce73518103
faqs/index.en.html=42999386131cea33dd8554e83259850d
faqs/index.es.html=7f657c2fff030b565dc350f45e25e31e
faqs/index.fr.html=ec6cd2e496fd1e73454e31ef616bece6
@@ -1343,7 +1356,7 @@
images/flags/pt.png=0148bb642bc6d4677a5552e3471f8300
images/flags/ro.png=cdbda2ea0c7d76bfe163eaae7217f275
index.en.html=fb36ea68dce5005d3cb854906b7cb931
-index.es.html=8198c35a4e152827853c63411c4f8b35
+index.es.html=9d46176b6f8c366f14ce0a75ea0e8c77
index.fr.html=4e258a6d7838c8258f032ed7878419c0
index.nl.html=f48fb0cd90de3c8e2e9b0fdb2d910114
jmol/Jmol.js=d43294a603003d75a6e5472e3c04faa9
Modified: trunk/Jmol-web/source/doc/fah/fah-projects.xml
===================================================================
--- trunk/Jmol-web/source/doc/fah/fah-projects.xml 2006-06-10 16:48:47 UTC
(rev 5214)
+++ trunk/Jmol-web/source/doc/fah/fah-projects.xml 2006-06-10 16:57:41 UTC
(rev 5215)
@@ -1817,10 +1817,10 @@
<fah_proj number="771" name="p771_vln3.8-0.4nopbc" public="y" file="y"
server="171.64.122.138" atoms="15787" preferred="8"
credit="33" frames="100" code="G" contact="dlucent"/>
- <fah_proj number="772" name="p772_vln2.8pbc-com" public="n" file="y"
+ <fah_proj number="772" name="p772_vln2.8pbc-com" public="y" file="y"
server="171.64.122.130" atoms="19399" preferred="300"
credit="149" frames="100" code="G" contact="vvishal"/>
- <fah_proj number="773" name="p773_vln2.8nopbc-com" public="n" file="y"
+ <fah_proj number="773" name="p773_vln2.8nopbc-com" public="y" file="y"
server="171.64.122.130" atoms="6115" preferred="300"
credit="44" frames="100" code="G" contact="vvishal"/>
<!-- This is [EMAIL PROTECTED]
@@ -2357,7 +2357,7 @@
<fah_proj number="993" name="p993_longfkcomp2" public="y" file="y"
server="171.65.103.151" atoms="14908" preferred="22" deadline="33"
credit="122" frames="100" code="DG" contact="mrshirts"/>
- <fah_proj number="994" name="p994_sundfkcomp" public="y"
+ <fah_proj number="994" name="p994_sundfkcomp" public="y" file="y"
server="171.65.103.151" atoms="14908" preferred="24" deadline="35"
credit="130" frames="100" code="DG" contact="mrshirts"/>
<fah_proj number="997" name="pAla7-2" public="y"
@@ -2680,13 +2680,13 @@
server="171.64.122.112" atoms="425" preferred="7"
credit="28" frames="20" code="T" contact="csnow"/>
<fah_proj number="1110" name="p1110_L939_K12M_nat_min1" public="y" file="y"
- server="171.64.122.120" atoms="393" preferred="20"
+ server="171.64.122.120" atoms="393" preferred="10"
credit="249" frames="400" code="T" contact="csnow"/>
<fah_proj number="1111" name="p1111_L939_wt_ext_444K" public="y"
server="171.64.122.121" atoms="397" preferred="25" deadline="37"
credit="249" frames="400" code="T" contact="csnow"/>
<fah_proj number="1112" name="p1112_L939_K12M_nat_min1_355K" public="y"
file="y"
- server="171.64.122.120" atoms="393" preferred="20"
+ server="171.64.122.120" atoms="393" preferred="10"
credit="249" frames="400" code="T" contact="csnow"/>
<fah_proj number="1113" name="p1113_ribo_solvent1" public="y" file="y"
server="171.67.89.154" atoms="76754" preferred="38" deadline="57"
@@ -2838,6 +2838,12 @@
<fah_proj number="1163" name="p1163_L939_K12M_298K_DT_50ns" public="y"
file="y"
server="171.64.122.133" atoms="393" preferred="5" deadline="68"
credit="241" frames="400" code="T" contact="csnow"/>
+ <fah_proj number="1164" name="p1164_RIBO_H2O_froz" public="y"
+ server="171.65.103.156" atoms="91787" preferred="14" deadline="82"
+ credit="600" frames="100" code="G" contact="dlucent"/>
+ <fah_proj number="1165" name="p1165_RIBO_H2O_froz" public="y"
+ server="171.65.103.156" atoms="91787" preferred="14" deadline="82"
+ credit="600" frames="100" code="G" contact="csnow"/>
<!-- Projects 1200 to 1299 -->
<fah_proj number="1200" name="p1200_A21nat94_gbsa305K" public="y"
@@ -3291,7 +3297,7 @@
<fah_proj number="1479" name="p1479_tet_1479_1" public="y" file="y"
server="171.64.122.134" atoms="126006" preferred="35" deadline="52"
credit="364" frames="100" code="G" contact="kasson"/>
- <fah_proj number="1480" name="p1480_dppc_chol" public="y"
+ <fah_proj number="1480" name="p1480_dppc_chol" public="y" file="y"
server="171.64.122.134" atoms="11120" preferred="36" deadline="53"
credit="376" frames="500" code="A0" contact="kasson"/>
<fah_proj number="1481" name="p1481_tet_2nm" public="y" file="y"
@@ -3306,7 +3312,7 @@
<fah_proj number="1486" name="p1486_hafp_fus" public="y" file="y"
server="171.65.103.68" atoms="33209" preferred="50" deadline="200"
credit="300" frames="0" code="A0" contact="kasson"/>
- <fah_proj number="1487" name="p1487_DPPC_DOPC_CHOL" public="n" file="y"
+ <fah_proj number="1487" name="p1487_DPPC_DOPC_CHOL" public="y" file="y"
server="171.65.103.68" atoms="87920" preferred="47" deadline="150"
credit="1161" frames="0" code="A0" contact="kasson"/>
<fah_proj number="1488" name="p1488_Protein in POPC" public="y" file="y"
@@ -3321,9 +3327,12 @@
<fah_proj number="1491" name="p1491_Membrane" public="n" file="y"
server="171.65.103.68" deadline="4"
credit="12" frames="100" code="A0" contact="kasson"/>
- <fah_proj number="1492" name="p1492_membrane_protein" public="n" file="y"
+ <fah_proj number="1492" name="p1492_membrane_protein" public="y" file="y"
server="171.65.103.68" atoms="18894" preferred="33" deadline="48"
credit="170" frames="0" code="A0" contact="kasson"/>
+ <fah_proj number="1493" name="p1493_Protein" public="n" file="y"
+ server="171.65.103.68" atoms="23442" preferred="33" deadline="59"
+ credit="210" frames="0" code="A0" contact="kasson"/>
<!-- Projects 1500 to 1599 -->
<fah_proj number="1500" name="p1500_FSnat_273_dd19_lowv" public="y" file="y"
@@ -3728,9 +3737,15 @@
<fah_proj number="1809" name="p1809_Collagen_POG10new_refolding" public="y"
file="y"
server="171.65.103.158" atoms="1116" preferred="30" deadline="44"
credit="153" frames="100" code="A" contact="spark7"/>
- <fah_proj number="1811" name="p1811_COL1_121_fragments" public="n"
+ <fah_proj number="1811" name="p1811_COL1_121_fragments" public="y" file="y"
server="171.65.103.158" atoms="57328" preferred="95" deadline="141"
- credit="1024" frames="100" code="G" contact="spark"/>
+ credit="512" frames="100" code="G" contact="spark"/>
+ <fah_proj number="1812" name="p1812_Collagen_POG10more_restrained_unfolding"
public="n" file="y"
+ server="171.65.103.158" atoms="1116" preferred="5" deadline="10"
+ credit="19" frames="100" code="A" contact="spark7"/>
+ <fah_proj number="1813"
name="p1813_Collagen_Brodskymore_restrained_unfolding" public="n" file="y"
+ server="171.65.103.158" atoms="1125" preferred="5" deadline="10"
+ credit="19" frames="100" code="A" contact="spark7"/>
<fah_proj number="1850" name="p1850_Myosin6_PT_US" public="y" file="y"
server="171.65.103.158" atoms="1205" preferred="35" deadline="52"
credit="182" frames="100" code="A" contact="spark7"/>
@@ -3743,6 +3758,9 @@
<fah_proj number="1860" name="p1860_Myosin6_PT_US_TIP3P_at9" public="n"
server="171.65.103.158" atoms="29699" preferred="38" deadline="56"
credit="198" frames="100" code="G" contact="spark"/>
+ <fah_proj number="1861" name="p1861_Myosin6_PT_US_TIP3P" public="y" file="y"
+ server="171.65.103.158" atoms="36125" preferred="50" deadline="74"
+ credit="267" frames="100" code="G" contact="spark"/>
<!-- Projects 1900 to 1999 -->
<fah_proj number="1900" name="p1900_32_water_molecules" public="y" file="y"
@@ -4118,19 +4136,19 @@
<fah_proj number="2118" name="p2118_ww_domain_mutant_5_am96" public="y"
file="y"
server="171.64.122.141" atoms="591" preferred="77" deadline="114"
credit="412" frames="100" code="G" contact="densign"/>
- <fah_proj number="2119" name="p2119_ww_domain_mutant_1_am99" public="y"
+ <fah_proj number="2119" name="p2119_ww_domain_mutant_1_am99" public="y"
file="y"
server="171.64.122.141" atoms="604" preferred="77" deadline="114"
credit="408" frames="100" code="G" contact="densign"/>
<fah_proj number="2120" name="p2120_ww_domain_mutant_2_am99" public="y"
file="y"
server="171.64.122.141" atoms="580" preferred="77" deadline="114"
credit="408" frames="100" code="G" contact="densign"/>
- <fah_proj number="2121" name="p2121_ww_domain_mutant_3_am99" public="y"
+ <fah_proj number="2121" name="p2121_ww_domain_mutant_3_am99" public="y"
file="y"
server="171.64.122.141" atoms="572" preferred="77" deadline="114"
credit="408" frames="100" code="G" contact="densign"/>
<fah_proj number="2122" name="p2122_ww_domain_mutant_4_am99" public="y"
file="y"
server="171.64.122.141" atoms="572" preferred="77" deadline="114"
credit="408" frames="100" code="G" contact="densign"/>
- <fah_proj number="2123" name="p2123_ww_domain_mutant_5_am99" public="y"
+ <fah_proj number="2123" name="p2123_ww_domain_mutant_5_am99" public="y"
file="y"
server="171.64.122.141" atoms="591" preferred="77" deadline="114"
credit="408" frames="100" code="G" contact="densign"/>
@@ -4396,4 +4414,13 @@
<fah_proj number="2507" name="p2507_A21_agbnp_amber99" public="n" file="y"
server="171.64.122.139" atoms="222" preferred="42" deadline="61"
credit="215" frames="100" code="GB" contact="luttmann"/>
+ <fah_proj number="2509" name="p2509_BBA5_pfold" public="y" file="y"
+ server="171.64.122.139" atoms="3385" preferred="41" deadline="61"
+ credit="215" frames="100" code="GB" contact="luttmann"/>
+ <fah_proj number="2510" name="p2510_BBA5_pfold" public="y" file="y"
+ server="171.64.122.139" atoms="1885" preferred="46" deadline="68"
+ credit="241" frames="100" code="GB" contact="luttmann"/>
+ <fah_proj number="2511" name="p2511_BBA5_pfold" public="y"
+ server="171.64.122.139" atoms="1285" preferred="27" deadline="39"
+ credit="136" frames="100" code="GB" contact="luttmann"/>
</fah_projects>
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