[Jmol-commits] SF.net SVN: jmol:[18343] trunk/Jmol/src

[hansonr]

Revision: 18343
          http://sourceforge.net/p/jmol/code/18343
Author:   hansonr
Date:     2013-06-17 22:35:26 +0000 (Mon, 17 Jun 2013)
Log Message:
-----------
___JmolVersion="13.1.17_dev_2013.06.17"

bug fix: invertSelected on trajectory causes nullPointerException

Modified Paths:
--------------
    trunk/Jmol/src/JmolSmilesApplet.java
    trunk/Jmol/src/org/jmol/modelset/AtomCollection.java
    trunk/Jmol/src/org/jmol/viewer/Jmol.properties

Modified: trunk/Jmol/src/JmolSmilesApplet.java
===================================================================
--- trunk/Jmol/src/JmolSmilesApplet.java        2013-06-17 13:54:46 UTC (rev 
18342)
+++ trunk/Jmol/src/JmolSmilesApplet.java        2013-06-17 22:35:26 UTC (rev 
18343)
@@ -49,6 +49,7 @@
   @Override
   public void init() {
     System.out.println("JmolSmilesApplet init");
+    //System.out.println(find("C[C@@H]1CCCC[C@@H]1C","C[C@@H]1CCCC[C@@H]1C", 
false, false));
   }
 
   private static String lastError;

Modified: trunk/Jmol/src/org/jmol/modelset/AtomCollection.java
===================================================================
--- trunk/Jmol/src/org/jmol/modelset/AtomCollection.java        2013-06-17 
13:54:46 UTC (rev 18342)
+++ trunk/Jmol/src/org/jmol/modelset/AtomCollection.java        2013-06-17 
22:35:26 UTC (rev 18343)
@@ -1013,7 +1013,7 @@
       tainted[type] = BSUtil.newBitSet(atomCount);
     tainted[type].set(atomIndex);
     if (type  == TAINT_COORD)
-      validateBspfForModel(atoms[atomIndex].modelIndex, false);
+      validateBspfForModel(((ModelCollection) 
this).models[atoms[atomIndex].modelIndex].trajectoryBaseIndex, false);
   }
 
   private void untaint(int atomIndex, byte type) {

Modified: trunk/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- trunk/Jmol/src/org/jmol/viewer/Jmol.properties      2013-06-17 13:54:46 UTC 
(rev 18342)
+++ trunk/Jmol/src/org/jmol/viewer/Jmol.properties      2013-06-17 22:35:26 UTC 
(rev 18343)
@@ -9,7 +9,10 @@
 #  The quotes above look odd for a parameter file, but they are 
 #  important for the JavaScript version of Jmol.
 
-___JmolVersion="13.1.17_dev_2013.06.16b"
+___JmolVersion="13.1.17_dev_2013.06.17"
+
+bug fix: invertSelected on trajectory causes nullPointerException
+
 bug fix: POLYHEDRA with faceCenterOffset not saved in state properly; EDGES 
option nonfunctional
 
 new feature: {atomset1}.distance.min({atomset2})

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