Revision: 18500
http://sourceforge.net/p/jmol/code/18500
Author: hansonr
Date: 2013-07-28 00:10:14 +0000 (Sun, 28 Jul 2013)
Log Message:
-----------
___JmolVersion="13.2.3_dev_2013.07.27"
bug fix: Gaussian cube format changed and not recognized (extra "1" in third
line).
bug fix: PDB header don't do trim();
bug fix: isosuface ID @x ... becomes isosurface ID "@x"
bug fix: color chain broken
bug fix: rockets with color chain
bug fix: filter ":X" broken
bug fix: O not 2- in PDB adding hydrogens
bug fix: NWChem reader error
bug fix: JSmol 2-sided surface color problem due to Java2Script miscoding of
Number.shortValue()
bug fix: PyMOLMeshReader code clean-up.
bug fix: PyMOL mesh reader broken for EDS files
bug fix: MMCIF_PDBX structures not being read
bug fix: allow PyMOL PSE files reading as part of a set of files, not just by
itself
bug fix: quaternion plots not synched with originating structure
bug fix: 1skt.cif loses secondary structure (MMCIF_PDBX reader needed)
bug fix: set showTiming not functional
bug fix: set pdbAddHydrogens does not set formal charge on O(1-) or "O" of H2O
(2-)
bug fix: PNGJ files not properly caching, and PSE files with DOCACHE option
Modified Paths:
--------------
branches/v13_2/Jmol/src/org/jmol/viewer/Jmol.properties
Modified: branches/v13_2/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- branches/v13_2/Jmol/src/org/jmol/viewer/Jmol.properties 2013-07-27
23:24:29 UTC (rev 18499)
+++ branches/v13_2/Jmol/src/org/jmol/viewer/Jmol.properties 2013-07-28
00:10:14 UTC (rev 18500)
@@ -1,20 +1,16 @@
___JmolDate="$Date$"
___fullJmolProperties="src/org/jmol/viewer/Jmol.properties"
+# NOTE: This is not the development trunk, this is the release branch.
+# No new features should be added, just bug fixes for 13.2.
-# THIS IS THE DEVELOPMENT TRUNK
-
# Developers: to add a description of changes you have made,
-# add it on a line below the "___JmolVersion=..." line.
+# add it on a line below the "___version=..." line.
# Don't use ___ in your text, as that is the key for stripping out
# the information saved in the JAR version of this file.
-# The quotes above look odd for a parameter file, but they are
-# important for the JavaScript version of Jmol.
-___JmolVersion="13.3.3_dev_2013.07.27"
+___JmolVersion="13.2.3_dev_2013.07.27"
-code: reconfigured JSmol build no longer needs jsmol/make directory.
-
bug fix: Gaussian cube format changed and not recognized (extra "1" in third
line).
bug fix: PDB header don't do trim();
bug fix: isosuface ID @x ... becomes isosurface ID "@x"
@@ -24,43 +20,26 @@
bug fix: O not 2- in PDB adding hydrogens
bug fix: NWChem reader error
-TODO: mouse exit then release doesn't trigger release
-TODO: ingenol/jsmetest.htm?
-TODO: minimization set position calculation optimization?
-TODO: documentation (see below, including % units on measure distance)
-
-TODO: isosurface SLAB TRANSLUCENT 0.x color
- -- inherits color of isosurface when color parameter is absent
- -- TODO - properly save in JVXL file
-TODO: PyMOL uniqueAtomSettings for transparency
- -- will require by-vertex translucent option
-
bug fix: JSmol 2-sided surface color problem due to Java2Script miscoding of
Number.shortValue()
bug fix: PyMOLMeshReader code clean-up.
-JmolVersion="13.3.2"
-JmolVersion="13.3.2_dev_2013.07.21"
-
bug fix: PyMOL mesh reader broken for EDS files
-JmolVersion="13.3.1"
-JmolVersion="13.3.1_dev_2013.07.20"
-
bug fix: MMCIF_PDBX structures not being read
bug fix: allow PyMOL PSE files reading as part of a set of files, not just by
itself
bug fix: quaternion plots not synched with originating structure
-bug fix: 1skt.cif loses secondary structure (MMCIF_PDBX reader needed)
-
-new feature: calculate formalCharge
+bug fix: 1skt.cif loses secondary structure (MMCIF_PDBX reader needed)
bug fix: set showTiming not functional
bug fix: set pdbAddHydrogens does not set formal charge on O(1-) or "O" of H2O
(2-)
bug fix: PNGJ files not properly caching, and PSE files with DOCACHE option
-JmolVersion="13.3.0"
+new feature: calculate formalCharge
+JmolVersion="13.2.0"
+
JmolVersion="13.1.19_dev_2013.07.18"
new feature: set exportScale x.x
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