Revision: 20975
          http://sourceforge.net/p/jmol/code/20975
Author:   hansonr
Date:     2016-03-03 22:55:20 +0000 (Thu, 03 Mar 2016)
Log Message:
-----------


Modified Paths:
--------------
    trunk/Jmol/src/org/jmol/viewer/Jmol.properties

Modified: trunk/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- trunk/Jmol/src/org/jmol/viewer/Jmol.properties      2016-03-03 22:54:00 UTC 
(rev 20974)
+++ trunk/Jmol/src/org/jmol/viewer/Jmol.properties      2016-03-03 22:55:20 UTC 
(rev 20975)
@@ -65,8 +65,49 @@
 TODO: isosurface molecular has an issue with 2gb1
 TODO: slab SET will not be rendered correctly when exported because 
tm.transformPoint
 
-Jmol.___JmolVersion="14.5.3_2016.03.03"
+Jmol.___JmolVersion="14.5.3_2016.03.03b"
 
+bug fix: CIF reader _atom_site_cartn_x incompatible with _geom_bond
+ -- this fix now allows Jmol to read very simple CIF files that are equivalent 
to unlimited-atom MOL files
+ -- _ccdc_geom_bond_type is not required, defaulting to S
+ -- _ccdc_geom_bond_types include S, D, T, Q (quadruple), and A (aromatic) 
+        
+       data_icosahedron
+       loop_
+       _atom_site_label
+       _atom_site_Cartn_x
+       _atom_site_Cartn_y
+       _atom_site_Cartn_z
+       C01  0.0000000000  0.0000000000  9.5105651630
+       C02  8.5065080835  0.0000000000  4.2532540418
+       C03  2.6286555606  8.0901699437  4.2532540418
+       C04 -6.8819096024  5.0000000000  4.2532540418
+       C05 -6.8819096024 -5.0000000000  4.2532540418
+       C06  2.6286555606 -8.0901699437  4.2532540418
+       C07  6.8819096024  5.0000000000 -4.2532540418
+       C08 -2.6286555606  8.0901699437 -4.2532540418
+       C09 -8.5065080835  0.0000000000 -4.2532540418
+       C10 -2.6286555606 -8.0901699437 -4.2532540418
+       C11  6.8819096024 -5.0000000000 -4.2532540418
+       C12  0.0000000000  0.0000000000 -9.5105651630
+       loop_
+       _geom_bond_atom_site_label_1
+       _geom_bond_atom_site_label_2
+       _ccdc_geom_bond_type
+       C01 C02 S
+       C01 C03 S
+       C01 C04 S
+       C01 C05 S
+       C01 C06 S
+       C02 C03 S
+       C03 C04 S
+       C04 C05 S
+       C05 C06 S
+       ...etc... 
+
+
+JmolVersion="14.5.3_2016.03.03"
+
 bug fix: after SET echo ALL, background echo ... changes text color, not 
background color  
 
 JmolVersion="14.5.3_2016.03.02"

This was sent by the SourceForge.net collaborative development platform, the 
world's largest Open Source development site.


------------------------------------------------------------------------------
Site24x7 APM Insight: Get Deep Visibility into Application Performance
APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month
Monitor end-to-end web transactions and take corrective actions now
Troubleshoot faster and improve end-user experience. Signup Now!
http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140
_______________________________________________
Jmol-commits mailing list
Jmol-commits@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-commits

Reply via email to