Revision: 21465
http://sourceforge.net/p/jmol/code/21465
Author: hansonr
Date: 2017-03-29 00:08:53 +0000 (Wed, 29 Mar 2017)
Log Message:
-----------
Jmol.___JmolVersion="14.11.0-beta-2017-03-28"
new feature: color NUCLEIC
-- for nucleic only (others will be grey)
-- based on DSSR nucleic color scheme:
G green, C yellow, A red, T blue, U cyan
new feature: set backboneBlocks; set backboneBlockHeight x.x
-- for nucleic only
-- overrides set backboneSteps
-- must have DSSR data loaded using calculate structure DSSR or load =xxxx/dssr
-- displays a DSSR block for each base based on dssr.nts.frame
-- x.x is height of box in Angstroms (default 0.5)
new feature: color property DSSR type
-- where type is one of:
bulges
coaxStacks
hairpins
hbonds
helicies
iloops
isoCanonPairs
junctions
kissingLoops
multiplets
nonStack
nts
pairs
ssSegments
stacks
stems
-- color is based on index into the list of the given structures
-- 0 (not of that structure), 1 (first entry), 2 (second entry), etc.
-- for example:
load =4fe5/dssr
backbone -0.5;set backboneSteps;
color property dssr junctions
color {color=red} grey // just making "not this type" grey
instead of red
[ most bases are grey, but one region is green and one region is blue ]
Modified Paths:
--------------
trunk/Jmol/src/org/jmol/viewer/Jmol.properties
Modified: trunk/Jmol/src/org/jmol/viewer/Jmol.properties
===================================================================
--- trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2017-03-29 00:07:30 UTC
(rev 21464)
+++ trunk/Jmol/src/org/jmol/viewer/Jmol.properties 2017-03-29 00:08:53 UTC
(rev 21465)
@@ -51,6 +51,11 @@
Jmol.___JmolVersion="14.11.0-beta-2017-03-28"
+new feature: color NUCLEIC
+ -- for nucleic only (others will be grey)
+ -- based on DSSR nucleic color scheme:
+ G green, C yellow, A red, T blue, U cyan
+
new feature: set backboneBlocks; set backboneBlockHeight x.x
-- for nucleic only
-- overrides set backboneSteps
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