Hi miguel, In 5cpa, it was between the hetero atoms (hoh) surrounding the structure, jmol was drawing bonds between the hoh atoms that were close enough to assume a bond. The latest build of jmol doesn't draw these bonds anymore. 1e8a.pdb still forms those strange spider webs - the atoms at the centre of the 'webs' is a hetero CA 705,706.
Great jobs on the ribbons - they look *wicked* . Dave Dave Chandler PhD Student Western Australian Biomedical Research Institute Curtin University of Technology Phone: (08) 9361 5027 Web: www.wabri.org.au; www.curtin.edu.au View my postgraduate profile at http://members.iinet.net.au/~egene/ -----Original Message----- From: Miguel [mailto:[EMAIL PROTECTED] Sent: Saturday, May 15, 2004 3:37 AM To: [EMAIL PROTECTED] Cc: [EMAIL PROTECTED] Subject: bug report from february Dave, I just saw your bug report ... from Feb ... saying that there are problems with the bond connection algorithm. We are not using the same algorthim as RasMol. We are using something from OpenBabel. I downloaded 5CPA ... but it is huge Can you tell me which bonds are wrong? Miguel ------------------------------------------------------- This SF.Net email is sponsored by: SourceForge.net Broadband Sign-up now for SourceForge Broadband and get the fastest 6.0/768 connection for only $19.95/mo for the first 3 months! http://ads.osdn.com/?ad_id=2562&alloc_id=6184&op=click _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
