Take a look to http://bip.weizmann.ac.il/oca-docs/jmoltest/jmol3.html

Now, lets say that I want to bring the attention of the user to a
residue that's at this very moment on the other side of the molecule:
TYR 97, Chain A, Model 1. It's colored red, part of a group of
three or four.

You may see it by rotating the molecule with the mouse.
I would rather want to have a javascript call to start the rotation.

As long as Jmol knows internally the coordinates and position for every
element, it should be possible for Jmol, by receiving the info on
"TYR 97, Chain A, Model 1", to rotate the model if needed and to 
locate, in the center of the applet, the residue pointing to the user.

Is there something like this available?
If not, can you add this command to Jmol?

Something like this can place the needed residue in the center
and zoom on it:
  rotateTo 97
  zoom 200

Is there something like "blink 5" to have a residue to glow 5
times to call the user's attention?

Jaim
-- 
 Dr Jaime Prilusky                      | [EMAIL PROTECTED]
 R&D Bioinformatics and Data Management |
 Weizmann Institute of Science          | fax: 972-8-9344113
 76100 Rehovot - Israel                 | tel: 972-8-9344959

 info URL http://bip.weizmann.ac.il/staff/jaime_prilusky.html
 OCA is at http://bip.weizmann.ac.il/oca/





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