Bugs item #799963, was opened at 2003-09-03 20:27 Message generated for change (Comment added) made by michaelthoward You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=799963&group_id=23629
Category: Applet Group: None Status: Open Resolution: None Priority: 5 Submitted By: Nobody/Anonymous (nobody) Assigned to: Nobody/Anonymous (nobody) Summary: First atom not shown Initial Comment: I've used the Jmol applet on a few pages on my course website to view pdb files. The web site was done in Dreamweaver on my PowerBook. The pdb files were displayed fine except that the first carbon atom was not there. I edited the pdb file by duplicating the line corresponding to the first carbon atom. After doing that the molecule displayed perfectly. The problem with not displaying the first carbon atom was not due to the Mac browser being used as it occurred with Safari and IE 5 on a Mac, but also on IE in Windows. Also, any chance the atom limit could be increased to about 10,000? Jeff Hansen [EMAIL PROTECTED] ---------------------------------------------------------------------- >Comment By: Michael T Howard (michaelthoward) Date: 2003-09-04 00:23 Message: Logged In: YES user_id=608250 Jeff, Hmmm ... don't know about this one. Can you send me the pdb file that had the problem? Send it to [EMAIL PROTECTED] The current development version of Jmol has a new graphics engine. A primary motivation for this was to better support protein visualization. Rendering of backbones is now operational. Ribbons are in the works. Performance has been improved significantly and the atom limit has been raised to 64K atoms. I have successfully loaded a .pdb file with 40K atoms ... although performance is not particularly good. All this is in the development code that has not yet been released. It probably will not be released for about 2 months. However, the code is quite stable. Do you want to try out a pre-release version of the applet? (It may resolve your graphics/safari issue too). Miguel [EMAIL PROTECTED] ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=799963&group_id=23629 ------------------------------------------------------- This sf.net email is sponsored by:ThinkGeek Welcome to geek heaven. http://thinkgeek.com/sf _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
