Based upon reading the documentation, the RasMol scripting language has
several ambiguities. One of them is a conflict in predefined sets.

Amino acids have three letter abbreviations & 1 letter abbreviations
 a = ala -> alanine
 c = cys -> cystine
 g = gly -> glycine
 t = thr -> threonine
 ...

I also see that the predefined sets for the 4 nucleotide bases are
 a -> adenosine
 c -> cytidine
 g -> guanosine
 t -> thymidine

Can anyone shed any light on how this ambiguity is handled at run-time?

In practice, do people *use* the single letter amino acid abbreviations in
scripting?

Miguel








-------------------------------------------------------
This SF.net email is sponsored by OSDN developer relations
Here's your chance to show off your extensive product knowledge
We want to know what you know. Tell us and you have a chance to win $100
http://www.zoomerang.com/survey.zgi?HRPT1X3RYQNC5V4MLNSV3E54
_______________________________________________
Jmol-developers mailing list
[EMAIL PROTECTED]
https://lists.sourceforge.net/lists/listinfo/jmol-developers

Reply via email to