Feature Requests item #909872, was opened at 2004-03-04 16:53 Message generated for change (Tracker Item Submitted) made by Item Submitter You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379136&aid=909872&group_id=23629
Category: Interface Improvements Group: None Status: Open Priority: 5 Submitted By: Christoph Steinbeck (steinbeck) Assigned to: Nobody/Anonymous (nobody) Summary: Display ChemObject Properties as annotations Initial Comment: In order to revive the display of NMR shifts (which was a great feature in Jmol 4 or 5), we need a way to display things like Atom.getProperty(CDKConstants.NMR_SHIFT_CARBON) . In order to generalize this, I suggest the following scheme: If Jmol get an editbus.showChemFile/Model() request, it walks down the ChemObject hierarchy (file->sequence->model->and so on...), retrieves the keys from the hashtable (the one retrievable by ChemObject.getProperties()) and stores them in a suitable way. The user can then select what to display as an annotation. In order to enable this: - the menu "Display->Atom Labels" needs to get another item "Atom Property" which could either have subitems with all the parsed keys or - The menu "Edit->Preferences->Atoms->Default Property Label" list could be used for selection. A submenueitem list would be more convenient. I have lost the overview on how cdk chemobjects map onto Jmol datastructure. So I cannot really comment on how the properties should be transferred and handled.. In general, all CDK apps (JChemPaint, Jmol, Seneca) should have a general way of showing ChemObject properties as annotations to chemical structures. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379136&aid=909872&group_id=23629 ------------------------------------------------------- This SF.Net email is sponsored by: IBM Linux Tutorials Free Linux tutorial presented by Daniel Robbins, President and CEO of GenToo technologies. Learn everything from fundamentals to system administration.http://ads.osdn.com/?ad_id=1470&alloc_id=3638&op=click _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
