Bugs item #909315, was opened at 2004-03-03 21:36
Message generated for change (Comment added) made by michaelthoward
You can respond by visiting:
https://sourceforge.net/tracker/?func=detail&atid=379133&aid=909315&group_id=23629
Category: File Input/Output
Group: None
Status: Open
Resolution: None
Priority: 5
Submitted By: Michael T Howard (michaelthoward)
Assigned to: Michael T Howard (michaelthoward)
Summary: bugs with HETATM + atomID
Initial Comment:
-------- Original Message --------
Subject: Re: Jmol scripts
From: Jaime Prilusky <[EMAIL PROTECTED]>
Date: Tue, March 2, 2004 9:58
To: [EMAIL PROTECTED] (Miguel Howard)
According to Miguel Howard:
> I confirmed that && and || work in RasMol as
undocumented boolean
> operators. They are now added to Jmol.
Will this version be available for download?
Another:
I think that Jmol fails interpreting PDB files when
there's no space
between the label (HETATM) and the value (17519), as in
these lines from
1FZ9:
HETATM17519 C1 ETI 9001 61.663 49.780 58.929
0.60 40.01
C HETATM17520 C2 ETI 9001 60.395 49.983
58.173 0.60
40.01 C HETATM17521 I ETI 9001
59.134 51.275
59.287 0.60 40.01 I
----------------------------------------------------------------------
>Comment By: Michael T Howard (michaelthoward)
Date: 2004-03-13 12:20
Message:
Logged In: YES
user_id=608250
-------- Mensaje Original --------
Asunto: HETATM with large atom sequence number
De: "Miguel Howard" <[EMAIL PROTECTED]>
Fecha: Sab, 13 de Marzo de 2004, 12:19
Para: <[EMAIL PROTECTED]>
Jaim wrote:
> I think that Jmol fails interpreting PDB files when
there's no space
> between the label (HETATM) and the value (17519), as in
these lines
> from 1FZ9:
>
> HETATM17519 C1 ETI 9001 61.663 49.780 58.929
0.60 40.01
> HETATM17520 C2 ETI 9001 60.395 49.983 58.173
0.60 40.01
> HETATM17521 I ETI 9001 59.134 51.275 59.287
0.60 40.01
I am unable to reproduce this problem using 1FZ9 checked out
from the
rcsb.
Please let me know if you can reproduce it or if you
encounter other
problems.
(I believe that you had some other problem that I could not
reproduce
... perhaps there was some problem with the version of Jmol
that you
had.)
Miguel
----------------------------------------------------------------------
Comment By: Michael T Howard (michaelthoward)
Date: 2004-03-13 12:10
Message:
Logged In: YES
user_id=608250
cannot reproduce this error
send a message back to jaime
----------------------------------------------------------------------
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https://sourceforge.net/tracker/?func=detail&atid=379133&aid=909315&group_id=23629
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