>>I am not familiar with MOPAC and do not understand which file format you
>>are using to load the molecular models into Jmol.
>
> CML
>
>>>Jmol only calculates bond information if no bonds are given (However,
>> .pdb
>>files have some special rules).
>>
>>Tell me which file format you are using.
>>
>>Work with me on this and we will get it fixed.
>
> Thanks - I think I mentioned this some time ago and it seems to be
> specific to CML.

You must be using Jmol v9; there is still no support for CML in Jmol v10.

I am not familiar with the CML support in it ... talk to Egon.

Egon is currently helping me get it running with the Jmol v10 prerelease
code. We will make sure it works there.


Miguel



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