Bugs item #914992, was opened at 2004-03-12 15:03
Message generated for change (Settings changed) made by migueljmol
You can respond by visiting: 
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Category: Graphics
Group: None
Status: Open
Resolution: None
Priority: 5
Submitted By: Miguel (michaelthoward)
>Assigned to: Miguel (migueljmol)
Summary: nucleic acid chain rendering

Initial Comment:

In an email to mth on 2004 13 12 Jan wrote:

>>Because nucleic acids have a polarity like protein,
too (biosynthesis),
>>which run from *.O5* to *.O3* a small arrowhead on
the 3* end would be
>>nice and I like the rendering of the bases as plates
like MIDAS or
>>MolMol do, e.g. on:
>>http://www.imb-jena.de/cgi-bin/ImgLib.pl?CODE=264d
>>    
>>
>
>I don't really understand this.
>
>I have never seen MIDAS nor MolMol.
>  
>
on the above mentioned page there are examples
http://www.imb-jena.de/ImgLibPDB//264d/264d_midas_1.gif
http://www.imb-jena.de/ImgLibPDB//264d/264d_molmol_1.gif

>Rendering an arrow would be easy to do.
>
>Someone would need to tell me where to put it.
>  
>
have a look at the RasMol (and image) annotation on
http://www.imb-jena.de/cgi-bin/Piet/helixparameter.pl?code=264d
*.O5* is labeled 5'-end Strand
the arrow should be on the opposite end 3'-end.



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