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On Thursday 27 May 2004 09:52, Peter Murray-Rust wrote:
> >It might be good if you had a very simple demo of your JTable stuff that
> >could be run from the command-line. Perhaps something that takes N
> >arguments (file names) from the command-line and creates a simple table
> >... file name + JmolPanel in each row.
>
> I am very interested in the JTable as there is a real need for Jmol to be
> able to look at multiple structures. (I created this in Jumbo3 - which used
> Jmol as a JPanel).
>
> How are the multiple structures to be read? I can see the following:
> - an explicit list of molecules on the command line

Yes, that's what the program does.

> - a format which supports multiple molecules (mainly SDF and CML at
> present) 

Not supported, each table row is a separate Jmol instance... But each instance 
can be passed a Reader, so the wrapper around the Jmol instances can split up 
a SDF (e.g. as done in CDK's IteratingMDLReader), and pass each MDL mol entry 
to a separate Jmol instance...

- - an implicit mechanism (e.g. all filenames with a given pattern 
> such as **/*.cml)

Supported, by command line expansion on Unix... MS-DOS also does expension at 
the command line, I think...

> - interactive input (open molecule and add to table).
> - a CMLRSS feed
>
> I would obviously be interested in anything that supported multiple CML
> molecules :-)

Egon

- -- 
[EMAIL PROTECTED]
PhD on Molecular Representation in Chemometrics
Nijmegen University
http://www.cac.sci.kun.nl/people/egonw/
GPG: 1024D/D6336BA6

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