Thanks, Miguel. See below.
Miguel wrote:
I've started converting the files in
http://jmol.sourceforge.net/demo/
to a database-based format. Tell me what you think. See
http://www.stolaf.edu/people/hansonr/jmol/docs/examples/atoms.htm
Looks *very* good to me.
I believe that we should say that the use of RasMol units is deprecated.
We will support it for backwards compatibility, but we do not want to
encourage new people to use them. Therefore, I don't think any of our
examples should make reference to them (like spacefill 100).
look now.
http://www.stolaf.edu/people/hansonr/jmol/docs/examples/labels.htm
Using the 'echo' to show the command is very effective. It seems to me
that we/I should pick a default echo color other than red. I never gave it
any thought, but just stuck it there. What color do you want for the
default in Jmol?
I like red....
Regarding the font command ... Java only supports three font names: serif, sanserif, monospaced
The font styles are: plain, bold, italic, bolditalic
so noted
I am very happy that you are putting square brackets around your group
names ... as in select [CYS]37.SG. I think it is quite important that we
do this
yes, I think so, too.
http://www.stolaf.edu/people/hansonr/jmol/docs/examples/select.htm
Also very good that you are using : in front of the chain specification.
I don't think that we should say 'color yellow' ... I think we should say
'color atoms yellow' in our examples.
ok.
which are all referenced automatically in
http://www.stolaf.edu/people/hansonr/jmol/docs/
I think it looks really good.'
Thanks. I'm working on cartoons and animation now.
Bob
Miguel
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