> There is also another somewhat related issue here. In Gaussian files,
> one can have both the 'standard orientation' and 'z-matrix orientation'
> in the output for each step in an optimization. The standard
> orientation has a different center than the z-matrix (and can be
> rotated too).

OK

> If one does a animation and both of these orientations
> get read as they come along in the file (i.e., alternating) you get a
> very disorienting kind of animation. I just committed some Gaussian
> files with z-matrix orientations in them. Check out, for instance,
> RK_g03_scan.log.

I'll take a look.

> We could consider only reading one of the two, but I don't want to
> enforce which data the user is able to see. So I hope that at one point
> in time we can have separate separate sets of AtomSets animated, e.g.,
> a z-matrix branch or a standard orientation branch. (Which goes in the
> direction of a hierarchy that I was talking about earlier. I am not
> suggesting that I want to push it now, but it provides a bit of an
> explanation of where I was coming from when I brought it up last week).

I think that makes sense.

> Cheers,
> Ren�
>
> PS It is really nice to see those atomSetNames :-) !

Agreed!


Miguel



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