Bugs item #1020349, was opened at 2004-09-01 08:07 Message generated for change (Comment added) made by migueljmol You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1020349&group_id=23629
Category: File Input/Output Group: None >Status: Closed >Resolution: Postponed Priority: 5 Submitted By: Bob Hanson (hansonr) Assigned to: Miguel (migueljmol) Summary: scr format? Initial Comment: Does Jmol have any capability similar to Chime in being able to read application/x-rasmol script files such as http://www.biochem.ucl.ac.uk/cgi-bin/cath/GetRasMol.pl?origin=pdbsum&pdb=1ma3 ? This seems to be a very compact way of transmitting structures+default scripting. It's coming from a perl script as Content-Type: application/x-rasmol I don't know what to extension to assign to it other than "pdb". And when I do that, Chime loads it from the hard drive, ignoring the script. Only when it comes from the Perl script with that application/x-rasmol MIME type does Chime read it in its intended fashion. Bob Hanson ---------------------------------------------------------------------- >Comment By: Miguel (migueljmol) Date: 2004-12-13 11:34 Message: Logged In: YES user_id=1050060 Jmol cannot handle this type of file. The compiler could easily be modified so that it could execute it as a script. But the ModelResolver dies because it cannot figure out what the file type is from the header ... the script does not look like any format that it recognizes. I am going to close this. Miguel ---------------------------------------------------------------------- Comment By: Miguel (migueljmol) Date: 2004-09-01 11:07 Message: Logged In: YES user_id=1050060 An 'scr' file is a mime-type that was set up for chime. There is no way to associate a mime-type with an applet. So I do not know of any way to launch the applet when a file of this type is seen. There is one very interesting thing about this file. They have the script command 'load inline' ... with the .pdb file embedded at the bottom. We had previously talked about extending the 'load inline' capabilities ... perhaps this is the right way to do it. ---------------------------------------------------------------------- Comment By: JR (interessent) Date: 2004-09-01 08:55 Message: Logged In: YES user_id=908382 I think this feature request should be called "load pdb inline" load pdb inline exit which is the necessary RasMol/Chime command to do this in Jmol. The model resolver my take such a first line (without #) to identify a script in front of PDB data? ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1020349&group_id=23629 ------------------------------------------------------- SF email is sponsored by - The IT Product Guide Read honest & candid reviews on hundreds of IT Products from real users. Discover which products truly live up to the hype. Start reading now. http://productguide.itmanagersjournal.com/ _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
