Will,

I am currently travelling and am not in a position to write a great deal
at this time.

Let me assure you that I will be able to pick up the dialog next week. And
I am confident that we can reach some type of arrangement.

One thing I would like to address right now ... you wrote:

>> I have written to the administrators of the Jmol project in
>> the past regarding this, but I have received no reply.

If we overlooked a message from you then I sincerely apologize; it was not
intentional.

I will get in touch with you next week.


Miguel


> Dr. York,
>
> You have my apologies for the confusion about the name.  I'm no longer
> the lead developer of the Jmol that is at sourceforge.  Although I
> started the project in 1998, I handed it over to Bradley Smith in 2000,
> and since then it has been handed over to Egon Willighagen in 2002.
> Egon and Miguel Howard are the ones in charge of the website and the
> code these days.  (To be honest, I don't think I'm on the developer's
> mailing list any more.)   I doubt there's much of my code left
> in the program.
>
> I can only suggest three solutions (one reasonable, one difficult, and
> one silly):
>
>    1) have both sites link to each other,
>    2) change one or both of the names, or
>    3) use "Jmol" for the sourceforge applet and "JMol" for yours.
>
> Would everyone be happy if there was a link exchange between the
> two sites?
>
> Best regards,
>
>   --Dan Gezelter
>
> I'm forwarding this on to the jmol-developers list at sf.net.
>
> will york wrote:
>> Dear Dr. Gezelter,
>>
>> I would like to congratulate you on the success of your molecular viewer
>> Jmol.  This project has really taken off and it looks like it is poised
>> to take over the area of browser-enabled molecular viewing in the near
>> future.
>>
>> You may be aware that I have also written a small java applet for
>> molecular viewing that I named Jmol in 1998, when I first wrote it.  If
>> not, you can visit my site at:
>>
>> http://www.ccrc.uga.edu/~will/jmol/jmol.html
>>
>> The goals of my Jmol program were and remain quite limited: to provide a
>> very small codebase for the graphical representation of molecular
>> coordinate files (PDB format).  This jar file containing this applet is
>> under 14 kB, allowing it to be rapidly downloaded even over very slow
>> connections.
>>
>> I have recently become more aware of some confusion on the part of
>> scientists who are interested in the graphical representation of
>> molecular structure.  Several people have understandably thought that my
>> Jmol is the same as your Jmol.  I would like to remedy this situation,
>> as I have no intention of claiming any credit for the great success
>> achieved by the Jmol project  at source forge.  At the same time, I
>> would like to let people know about my contributions to molecular
>> visualization (including my Jmol applet).  I have tried to figure out
>> who originally had the name Jmol, but I haven't been able to find any
>> definitive information regarding this.
>> I have considered changing the name of my applet, but I hesitate to do
>> so until I hear from the (source forge) Jmol developers to get your
>> opinion.  I have written to the administrators of the Jmol project in
>> the past regarding this, but I have received no reply.
>>
>> Please let me know what you think is an appropriate solution to this
>> situation.
>>
>> Sincerely,
>>
>> Will York
>> Associate Professor
>> Complex Carbohydrate Research Center
>> Department of Biochemistry and Molecular Biology
>> 315 Riverbend Road
>> Athens, Georgia 30602-4712 USA
>> Phone: 706-542-4628
>> Fax: 706-542-4412
>
>
> --
> ***********************************************
>    J. Daniel Gezelter
>    Assistant Professor
>    Department of Chemistry and Biochemistry
>    251 Nieuwland Science Hall
>    University of Notre Dame
>    Notre Dame, IN 46556-5670
>
>    phone:  +1 (574) 631-7595
>    fax:    +1 (574) 631-6652
>    e-mail: [EMAIL PROTECTED]
>    web:    http://www.nd.edu/~gezelter
> ************************************************
>
>
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23 Algonquin Avenue            tele 978-474-4559
Andover,  MA 01810-5527        cell 978-886-3697
USA                            fax  978-662-3126
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