Hi,
I believe that if you read a structure file with more than one set of
atoms (molecules, structures or frames), you should be able to show all
sets by issuing the command
'frame 0'
in the script window.
I am not familiar enough with the pdb file format to know whether it
allows one to define more than more than one, but xyz file formats and
such do allow that.
Cheers,
René
PS the name is Jmol not JMol (JMol is a different application).
On Jul 24, 2005, at 4:15 PM, Scott Menor wrote:
Hello,
I'm currently working on a web application using JMol.
We have already implemented part of our site using JMol (
http://flexweb.la.asu.edu/software/first/first_online/ ; free
registration required).
Overall, we've found JMol to be a great improvement over Chime but
there are two features that we could really use that don't seem to be
available yet.
First, one of our applications requires overlaying structures or
models (as with the enclosed figure).
It would also be nice (though not essential) if there were a way to
append a structure as a new model in an existing set of models. Our
application would involve a simulation on a server that generates a
set of models. A client-side script would periodically grab a new
model and tell JMol to append the new model to an existing set.
<flexibilityBackboneOverlay.small.png>
Thanks,
Scott
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