hi,

I find this log message from Jmol somewhat curious:

I see someone who does not have a carbonyl oxygen


I know what it means chemically, but I'm kinda curious what Jmol is doing about it. is it more like this:

"hey, this thing looks like an amino acid, but it's missing a carbonyl oxygen. so sorry, man - I'd like to help you out, but I can't include it in the protein set. you had better look into it."


or more like this:

"hey, this thing looks like an amino acid, except for a missing carbonyl oxygen. but this isn't such a big deal anyway, so I'll consider it a protein - but just this once, so you might want to fix it."

or is it saying something else entirely?


tim "friday nights are meant for Jmol" d
--
Timothy Driscoll                                em: [EMAIL PROTECTED]
molvisions - see. grasp. learn.                 ph: 919-368-2667
<http://www.molvisions.com/>                    im: molvisions
usa:virginia:blacksburg                         tx: [EMAIL PROTECTED]

"Pain heals. Chicks dig scars. Glory lasts forever."






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