Egon Willighagen wrote: >Hi Bob, Miguel, > > >
>... > > >Anyway, my next step is to update the getStructureIterator() accordingly, but >noted that a StructureIterator() is not aware of Jmol models at all... > >So, my questions: is this reasonable, i.e. are the HELIX stuff in PDB file >indeed always model independent? I know they are given in advance of the >actual "MODEL" statements, but is there nothing in the HELIX fields that >states for which model that HELIX is defined? And if there *is*, why is this >not reflected in the StructureIterator API? > >BTW, I am still using Jmol 10.2 in the Jmol plugin for now. Bob, is this >behaviour different in your branch? > > > Two things come to mind: 1) check what is done in CIF files. I'm almost certain the helix business is a subset of the data_ record. 2) find some example PDB files and see what they do. NMR models come to mind. 3) nothing different in 10.x, I think. I note that 10.2 isn't quite reading turns/helices properly in certain cases. 4) I'm pretty sure PDB files are messed up/ambiguous when it comes to multiple models. >Egon > > > ------------------------------------------------------------------------- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642 _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
