Jmol Developers,
In order to generalize symmetry for any file reader, I did some
refactoring and cleaning today.
I refactored Viewer.Util as Util.ArrayUtil, and the parsing functions of
AtomCollectionReader into Util.Parser. Now AtomCollectionReader extends
Util.Parser and imports Util.ArrayUtil.
In addition, I moved all the symmetry handling out of the 5 readers that
were dealing with it -- RES, XMLCML, PDB, MOLPRO2, CIF -- into
AtomCollectionReader itself, making for much cleaner handling of
symmetry for any file reader. (You just add two or three hooks back into
AtomCollectionReader, and it's done.) This will allow spacegroup and {i
j k} extensibility for any file reader, including simple XYZ.
I added symmetry handling to the CML reader, but I haven't tested it.
Lots of file changes.
HOWEVER -- I can't commit, because Sourceforge is out of commission
today, apparently.
I'll try later tonight or tomorrow.
Bob
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