Hi, I have some code that brings up a JmolViewer with a IAtomContainer
object loaded into it. My code looks like:
JmolViewer viewer = jmolPanel.getViewer();
if (this.molecule != null)
viewer.openClientFile("", "", this.molecule);
else if (this.filename != null) {
}
However when I do this I am getting,
Exception in thread "main" java.lang.NoSuchMethodError:
org.jmol.api.JmolAdapter.getAtomSetCollectionAuxiliaryInfo(Ljava/lang/Object;)Ljava/util/Hashtable;
at org.jmol.viewer.Frame.<init>(Frame.java:223)
at org.jmol.viewer.ModelManager.setClientFile(ModelManager.java:78)
at org.jmol.viewer.Viewer.openClientFile(Viewer.java:1157)
at org.guha.rcdk.view.ViewMolecule3D.show(ViewMolecule3D.java:45)
Looking at the sources I see that this method is indeed missing.
I'm working with the latest SVN copy of Jmol.
Also, I've ended up using the unsigned Jmol jar file, since whenever I
try and use the signed version in my code I get the exception noted
below. Why is the application jar signed?
Exception in thread "main" java.lang.SecurityException: class
"org.jmol.api.JmolSelectionListener"'s signer information does not match signer
information of other classes in the same package
at java.lang.ClassLoader.checkCerts(ClassLoader.java:775)
at java.lang.ClassLoader.preDefineClass(ClassLoader.java:487)
at java.lang.ClassLoader.defineClass(ClassLoader.java:614)
at
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:124)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:260)
at java.net.URLClassLoader.access$100(URLClassLoader.java:56)
at java.net.URLClassLoader$1.run(URLClassLoader.java:195)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
at org.jmol.viewer.SelectionManager.<init>(SelectionManager.java:37)
at org.jmol.viewer.Viewer.<init>(Viewer.java:132)
at org.jmol.viewer.Viewer.allocateViewer(Viewer.java:150)
at org.jmol.api.JmolViewer.allocateViewer(JmolViewer.java:51)
at org.guha.rcdk.view.JmolPanel.<init>(JmolPanel.java:20)
at org.guha.rcdk.view.ViewMolecule3D.show(ViewMolecule3D.java:37)
-------------------------------------------------------------------
Rajarshi Guha <[EMAIL PROTECTED]>
GPG Fingerprint: 0CCA 8EE2 2EEB 25E2 AB04 06F7 1BB9 E634 9B87 56EE
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