just came across this recent article and thought it might be worth a  
look vis-a-vis Jmol:

<http://dx.doi.org/10.1016/j.jmgm.2006.02.012>

Efficient molecular surface generation using level-set methods
Tolga Can, Chao-I Chen and Yuan-Fang Wang
Journal of Molecular Graphics and Modelling
Volume 25, Issue 4, Pages 442-454 (December 2006)


caveat: I have not looked past the abstract yet. :-)


tim
-- 
Timothy Driscoll                                em: [EMAIL PROTECTED]
Virginia Bioinformatics Institute               ph: 540-231-3007
Bioinformatics I: M-1                           im: molvisions
Washington St., Blacksburg, VA 24061



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