Bugs item #1829276, was opened at 2007-11-09 17:31
Message generated for change (Tracker Item Submitted) made by Item Submitter
You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1829276&group_id=23629

Please note that this message will contain a full copy of the comment thread,
including the initial issue submission, for this request,
not just the latest update.
Category: Applet
Group: None
Status: Open
Resolution: None
Priority: 5
Private: No
Submitted By: molvisions (molvisions)
Assigned to: Miguel (migueljmol)
Summary: weird color application

Initial Comment:
hi,

this is a difficult bug to file because I can't pin down exactly when it 
happens (it seems random at the moment).  I am loading an external file with 
values, and coloring atoms according to those values.  a demo can be seen here:

<http://www.molvisions.com/impas/>

or, since my server is wicked slow, downloaded from here:

<http://www.molvisions.com/impas/gly_bact_min.tar>

basically, I load the external file and then use blocks of select statements to 
color atoms; for example:

select backbone1 and (property_potc1 > 1 and property_potc1 < 3)
color atoms yellow
color atoms translucent 0.9

clicking a radio button in the above demo should apply a single coloring script 
of this form.  but, even though the script and data for each button are exactly 
the same, often the resulting color scheme is very different.  for example, 
sometimes I see a nice, and extremely wrong, rainbow gradient in the right-hand 
structure.  but not always.

I hope that description made sense.  can anyone see a reason why this might be 
happening?

thanks,

tim driscoll


----------------------------------------------------------------------

You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1829276&group_id=23629

-------------------------------------------------------------------------
This SF.net email is sponsored by: Splunk Inc.
Still grepping through log files to find problems?  Stop.
Now Search log events and configuration files using AJAX and a browser.
Download your FREE copy of Splunk now >> http://get.splunk.com/
_______________________________________________
Jmol-developers mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-developers

Reply via email to