Hi Andreas, On Thu, Aug 21, 2008 at 5:11 PM, Andreas Prlic <[EMAIL PROTECTED]> wrote: > the graphical image for the BioJava data model in that blog is not > completely correct. It is true that it follows the > Interface/Implementation approach,but the data model is more > hierarchical than shown on that image. > > Structure > | > Models(s) > | > Chain(s) > | > Group(s) > | > Atom(s) > > > There are different iterators and utiliy classes that allow to access > arrays of Atoms or iterate over all amino acids, do calculations etc. > It can deal with ATOM vs SEQRES issues and a couple of other things. > For more docu on what you can do with the BioJava structure modules > see here: > http://biojava.org/wiki/BioJava:CookBook#Protein_Structure
Thanx for your feedback! Please add this comment to the blog too, so that Gilleain won't miss it... Egon -- ---- http://chem-bla-ics.blogspot.com/ ------------------------------------------------------------------------- This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications with Moblin SDK & win great prizes Grand prize is a trip for two to an Open Source event anywhere in the world http://moblin-contest.org/redirect.php?banner_id=100&url=/ _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
