On Fri, Oct 3, 2008 at 4:01 PM, Eduardo Sanz García <[EMAIL PROTECTED]>wrote:
> Hi all,
>
> I was wondering if Jmol could add support to display electron density
> maps, for example MRC, that are used in cryoEM.
> See:
> http://en.wikipedia.org/wiki/MRC_(file_format)<http://en.wikipedia.org/wiki/MRC_%28file_format%29>
>
It would be great to expand Jmol use into this area. In combination with the
JVXL format, I think this crowd would go nuts. What do you use currently to
deliver a three-dimensionally interactive surface representation over the
web?
Jmol could be extended to read these files relatively easily. I would need
to have some samples along with specific cutoff values and what the results
should look like. With that in hand, it should be pretty easy for me to
write this extension.
> Is Jmol able to display isosurfaces?
>
> I was thinking that it would be useful to have an applet to display my
> maps.
>
oh, yes! We'll do that.
>
> Additionally, the EMDB, or the EM Navigator could take advantage of that.
> http://www.ebi.ac.uk/msd-srv/docs/emdb/index.html
> http://emnavi.protein.osaka-u.ac.jp/index.php
>
> Thank you very much.
>
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