Nico, Bob can give you the details, but I think both things you suggest are possible. However, I see one big problem: in general I do not think we should default to opening a live Jmol in the wiki. A static picture which can then become a live Jmol is more appropriate. I think you want behavior more like the Jmol pop-in implemented by the export-to-web function. An example page is here: http://www.uwosh.edu/faculty_staff/gutow/Jmol_Web_Page_Maker/Export_to_web_tutorial.shtml
You can use the code in this page which is based on a template made by Angel. Note since this page was generated we have updated things to perform better. You would probably be best off generating a new page in Jmol and lifting the code from that. Jonathan On Nov 23, 2010, at 1:08 PM, Nicolas Vervelle wrote: > Hi, > > I have started working again on the extension to include Jmol in > Wikipedia. > > The current extension is not as simple as some Wikipedia people > would like (see this bugzilla report). > One idea there is that a Media handler for molecular files should be > developed (so that an image could be displayed automatically when > going on the page of a CML file). It's interesting but seems > complicated. > > I have an other idea that could be not really hard to develop but > would enable to show a lot of molecules easily. > But I need more infos on what Jmol is currently capable (I have lost > track and since I am no chimist at all that's difficult to follow). > The idea is to use a simple tag with only an identifier inside to > choose the molecule. > What do you think of the ideas below ? > > Can Jmol show a molecule having just a SMILES string ? > If so, what are the commands that need to be executed ? > I think we could add a syntax for Wikipedia where a user would > simply have to add something like <smiles>XXXX</smiles> to display > the molecule in Jmol. > > Also, can Jmol retrieve a molecular file using only an identifier > (like getting the molecule on the pdb database) ? > What are the options and the commands ? > That would allow the same kind of addition : <pdb>XXXX</pdb> to > display a molecule from the pdb database. > > Nico > ------------------------------------------------------------------------------ > Increase Visibility of Your 3D Game App & Earn a Chance To Win $500! > Tap into the largest installed PC base & get more eyes on your game by > optimizing for Intel(R) Graphics Technology. Get started today with > the > Intel(R) Software Partner Program. Five $500 cash prizes are up for > grabs. > http://p.sf.net/sfu/intelisp-dev2dev > _______________________________________________ > Jmol-developers mailing list > Jmol-developers@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-developers Dr. Jonathan H. Gutow Chemistry Department gu...@uwosh.edu UW-Oshkosh Office:920-424-1326 800 Algoma Boulevard FAX:920-424-2042 Oshkosh, WI 54901 http://www.uwosh.edu/facstaff/gutow ------------------------------------------------------------------------------ Increase Visibility of Your 3D Game App & Earn a Chance To Win $500! Tap into the largest installed PC base & get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
