Bugs item #3363306, was opened at 2011-07-11 19:21
Message generated for change (Tracker Item Submitted) made by nickengland
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Category: File Input/Output
Group: None
Status: Open
Resolution: None
Priority: 5
Private: No
Submitted By: NickEngland (nickengland)
Assigned to: Bob Hanson (hansonr)
Summary: CML atoms with ids of \"a1\" and \"a1_1\" cause ettor

Initial Comment:
XmlCmlReader.java line 394 sets isSerial to true if it reads an atom with id 
"a1". If there are atoms with ids which are not serial later in the document 
(eg, "a1_1") then the bonds do not load correctly.

Renaming all the ids from aX to bX cause the moelcule to load correctly.

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