I don't use the jmol.sh script very often, but one possibility is that the
memory defaults in it are too small for the virtual machine he is using.
Another guess is that he is using the IceTea JVM and not the Sun/Oracle JVM.
IceTea is getting better, but I've still had occasional problems with it.
Jonathan
On Dec 4, 2011, at 12:02 PM, Robert Hanson wrote:
> Hellow, Linux experts? What can you suggest for Moon?
>
> On Sun, Dec 4, 2011 at 12:44 AM, Moon Cheung <[email protected]> wrote:
> It has the same problem in running Jmol.sh from the command line.This time
> Jmol will stop at "Creating main window".
> And once the problem occurs, it will occur continuously after i kill the
> process.
>
> Best Regards
> Moon
>
>
> 2011/12/4 Robert Hanson <[email protected]>
> Does Jmol.sh run generally on your machine from the command line?
>
> On Sat, Dec 3, 2011 at 6:25 AM, Moon Cheung <[email protected]> wrote:
> Hi,
>
> When i use system call in c to call Jmol under Linux(the code is
> "(void)system("/opt/QtSDK/Projects/jmol-12.2.7/jmol.sh -s
> /opt/QtSDK/Projects/testing3.pdb.spt")")
> And testing3.pdb.spt is a Rasmol Script in the code.
> There is a problem that the Jmol will stop running at Setting up drag and
> drop.
> This situation will occur 1 around 5 times.
> What can i do with this situation?
>
> Best Regards,
> Moon
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
> _______________________________________________
> Jmol-developers mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
> _______________________________________________
> Jmol-developers mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
> _______________________________________________
> Jmol-developers mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
> _______________________________________________
> Jmol-developers mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
Dr. Jonathan H. Gutow
Chemistry Department [email protected]
UW-Oshkosh Office: 920-424-1326
800 Algoma Boulevard FAX:920-424-2042
Oshkosh, WI 54901
http://www.uwosh.edu/facstaff/gutow
------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure
contains a definitive record of customers, application performance,
security threats, fraudulent activity, and more. Splunk takes this
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
_______________________________________________
Jmol-developers mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-developers
