Hello Gusts

You will receive replies from more authoritative sources, but I will share my 2 
cents.

First, although Jmol.js is the standard way of using Jmol applets, there is a 
recent 
replacement that uses an object-based syntax. You should make sure to look at 
it (only for 
Jmol 12.3.x). It's made up with JmolCore.js, JmolApi.js, JmolApplet.js, 
JmolControls.js, etc 

http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/appletweb/

I have used Jmol with jQuery without trouble, but I'm not an expert on jQuery 
at all.

Please be careful with the upper/lowercase. There have been concerns before 
with other 
software, so there should be no change in the name.


> Firefox 13.0.1 on Windows - started up, but displayed status message 
> "Jmol script terminated"

Do you have a test URL?
I'd like to have a look.


> And if we are still on a subject, where can I find some documentation on 
> external methods, that can be accessed through JavaScript? 

Whatever is available in Jmol.js is what most of us use to interface with Jmol. 
But you will get 
advice from Bob.


> except for a applet.script() method

 I bet that's pretty old. For most browsers the applet tag is not being used, 
but the object tag 
is.
And from that it has been born the new "Jmol object" model that I mentioned 
above. That 
creates a Jmol DOM/javascript object and has methods for it. I Haven't gone 
through details 
yet, as this is quite recent..





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